| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0910 |
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| Symbol | thiF |
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| ID | 5710600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 933279 |
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| End bp | 934244 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641266820 |
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| Product | UBA/THIF-type NAD/FAD binding protein |
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| Protein accession | YP_001532256 |
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| Protein GI | 159043462 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0923033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCT ACGCGCGCCA GGTCCAACTG CCGCAGGTCG GCGCCGAAGG TCAGGCGCGG
CTGGCGGCGG CCCATGTGCT GGTCATCGGC GCGGGCGGGC TCGCGGCCCC AGCCCTGAGT
TATCTCGCAG GCGCGGGCGT GGGGCGGATC ACGGTGATGG ATGCGGACCG CGTGAGCCTG
TCGAACCTGC ACCGCCAGAC GCTCTTCACC ATGGACGATA TCGGCGCGCC CAAGGCCGAG
GCCGCCGCCG CGCGCCTGCG CGCGCAGAAC CCCGAGGTGA CGATCACCGC GCTCTGCGAG
GCCTTCACCC CGGCCAACGG CGCGGCCCGG CTCGCCGGGG TCGACCTGGT GCTGGATTGC
GCCGACAGCT ATGCGGCCAG CTACACCGCC TCGGACCTGT GCGGGCCGGT GCCGCTGATC
ACTGCCTCGG TGCTCGGGGC CTCGGGCTAC GTGGCAGGCT GCTGCGGCGG TGCGCCGTCC
TTGCGCGCGC TTTTCCCCGA CCCGCCCGAC AGTGCCGCGA GTTGCGCCAC CGCGGGCGTG
TTCGGCCCGG TGGTCGGCGC CCTGGGGGCA TTGCAGGCGC AGATGGCGCT GGGGGCGCTC
CTCGGGCTGA AGCCCTCCTC GCTCGGCCAG GCGATCACCC TCGACACCGC CACATGGCGG
ATGGCCAGCT TCCGCTTCGA CGCAGCCCCG GAGCCGGACC GCGCCCTGCG CTTCATCGCC
GCCAGTCAGA TCACCGAGAC CGACGCGGTC TACGACCTGC GCCCGGAATC CGAAGCCCGA
CACACTGTCG GGCAGGGTGC CATACGTTTG CCCGACACTT GCCCGACACA AATCCGACCG
GCAAAACGGG TCGTTCTGGC CTGCTCCAGC GGATTGCGCG CCTGGCGTCT CGGCACTGCC
CTCGGCCCCG ATTTTCCCGG CGAAATCGTC CTTGTCGCCG ATCCCCAACA GGAGACCACC
CCATGA
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| Protein sequence | MTRYARQVQL PQVGAEGQAR LAAAHVLVIG AGGLAAPALS YLAGAGVGRI TVMDADRVSL
SNLHRQTLFT MDDIGAPKAE AAAARLRAQN PEVTITALCE AFTPANGAAR LAGVDLVLDC
ADSYAASYTA SDLCGPVPLI TASVLGASGY VAGCCGGAPS LRALFPDPPD SAASCATAGV
FGPVVGALGA LQAQMALGAL LGLKPSSLGQ AITLDTATWR MASFRFDAAP EPDRALRFIA
ASQITETDAV YDLRPESEAR HTVGQGAIRL PDTCPTQIRP AKRVVLACSS GLRAWRLGTA
LGPDFPGEIV LVADPQQETT P
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