| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0834 |
|---|
| Symbol | |
|---|
| ID | 5711460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 843077 |
|---|
| End bp | 843994 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641266743 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_001532180 |
|---|
| Protein GI | 159043386 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATGT CGTCCAATCA TGTGCCCGCT GCGGCGGGTC TGCTGTTGCT CGCGATGGCG
CTGATCGCCT TTGTCGACAA TTTCGTGCGG CTGATCGCCG AGGATGCGGG GCTGTGGCAA
TTCCTCGCCG TTCGCAGCGC GATGGCATTG CCGCTGCTGT GGGGTGTGGC GCGCTGGCGC
GGCTGGTCGC TGCGGCCGGT CAGGTGGCGG GCGGTGATCC AGCGCTCGGT GCTCATGGCG
ACGGCGCTGA CGCTGTATTT CGCAGCGGTG GCGGTGGTGC CGATCGCGAT TGCGGGCGCG
GGGCTTTATA CCTCGCCGAT CTTCGTGCTG CTGATCTCGA TCGTGCTGTT CGGGGTGCGG
ATCGGGGTCT GGCGGGCGGC GGCGGTGGCC CTGGGGTTTG CCGGTGTGCT GCTGGTGCTG
CAGCCGGGCA GCGCGGCGTT CTCGCCGCTG ACCTTGTTGC CGGTGCTGGC GGGGGCCCTC
TATGCGGCCG GGGCGCTGAC CACGCGGCGG CTCTGCATGG GCGAGAGCCC GGCCTGCCTC
GTGTTCGGGT TTTTCCTGGT GATGGCGGTC TATGGCAGCC TTGGGTTGGC GGTGCTGGCC
CTGGTCGGGG CGGGTGGCGC GCCGGGGGAG GCGAGTTTCT TCGGCACGGG CTGGCAGGAG
GTGACGCCGC GATTTCTGTG GCTGTGCCTG ATGCAGGCGA TCCTGTCGCT GGTGGCGGTG
GGCTGCCTCG TGCGGGCCTA CCAGATCGCG GATCCGTCCT ATGTGTCGGT CTTCGAGTAC
AGTTTTTTGC CCTTTGCCGG GGTCTGGGGA TACTTGCTGT GGTCGGATGT GCCAGGGCCG
GTCGCGATCC TCGGGATCGG CTGCATCCTC GTGGCGGGCT GCGCGATCAT CCTGCGCGGG
CGGAAAGTGG CGGCCTGA
|
|---|
| Protein sequence | MQMSSNHVPA AAGLLLLAMA LIAFVDNFVR LIAEDAGLWQ FLAVRSAMAL PLLWGVARWR
GWSLRPVRWR AVIQRSVLMA TALTLYFAAV AVVPIAIAGA GLYTSPIFVL LISIVLFGVR
IGVWRAAAVA LGFAGVLLVL QPGSAAFSPL TLLPVLAGAL YAAGALTTRR LCMGESPACL
VFGFFLVMAV YGSLGLAVLA LVGAGGAPGE ASFFGTGWQE VTPRFLWLCL MQAILSLVAV
GCLVRAYQIA DPSYVSVFEY SFLPFAGVWG YLLWSDVPGP VAILGIGCIL VAGCAIILRG
RKVAA
|
|---|
| |