Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0777 |
Symbol | thrS |
ID | 5711212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 782164 |
End bp | 784128 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641266685 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_001532123 |
Protein GI | 159043329 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.795013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.073481 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAGA TCTCTCTCAC CTTTCCCGAT GGCAATGCAC GCGATTTCGA CGCAGGGGTC ACACCGGCGG AGGTCGCCGC CAGCATCTCC ACCTCCCTTG GCAAGAAGGC CATCTCCGCC ACCGTGAACG GCGCGCATCA CGACCTGCAA TGGCCCATCG ACGCCGATGC CAGCATCGCG ATCCACACGC TCAAGGACGA CGCCCAGGCG CTGGAGCTGA TCCGCCACGA CTGCGCCCAT ATCATGGCCC GCGCCGTGCA GGAGATCTGG CCCGATGTGA AAGTCACCAT CGGCCCGGTG ATCGAGAACG GCTTCTATTA CGATTTCGAC CGGGCGGAGC CCTTCACCCC CGAGGATCTC GGCGCAATCG AGGCCAAGAT GAAAGAGATC ATCAACGCCC GCGATCCCGT CCGCACAGAG GTCTGGGACC GTCCCCGCGC CATCGCCCAT TACGAGGCGA ATGGCGAGCC CTACAAGGTC GAGTTGATCG AGGCGATCCC GGGCAACGAG CCGCTGCGCA TGTACTGGCA TGGCGATTGG CAGGATCTCT GCCGCGGCCC GCACCTGCAA CATACCGGGC AAGTGCCCGC GGACAGCTTC AAGCTGATGT CCGTCGCGGG GGCCTATTGG CGCGGGGACA GCTCCCGTCC GATGCTGCAA CGGATCTACG GCGTGGCGTT CCAGAACCGC GACGCCCTGA AAAAACACCT CCACATGCTG GAGGAAGCCG CCAAGCGCGA TCACCGCAAG CTCGGCCGCG AGATGAACCT GTTTCACATG CAGGAAGAGG CCCCCGGGCA GGTCTTCTGG CACCCTAACG GCTGGACCGT CTACACCACG TTGCAGGACT ACATGCGCCG CCGTCAGCGC GAGAATGGCT ATGTGGAGGT CAACACCCCG CAGGTCGTCG ACCGCAAGCT GTGGGAGGCC TCCGGCCACT GGGACAAGTA CCAGGAAAAC ATGTTCATCG TCGAAGTGGA CGAAGAACAT GCCCGCGAAA AGGCGATCAA TGCCCTGAAA CCGATGAACT GCCCCTGCCA TGTGCAGGTC TACAACCAGG GCCTGAAATC CTACCGCGAC CTGCCCCTGC GCATGGCCGA ATTCGGCGCC TGCAACCGCT ATGAGCCCTC GGGCGCGCTG CACGGGCTCA TGCGGGTGCG CGGCTTCACC CAGGACGACG CCCATATCTT CTGCACCGAG GACCAGATCC AGGACGAGAC CGCCCGCTTC ATCCGGATGC TGAGCACGAT CTATCGCGAC CTGGGTTTCG AGAGCTTCGA CATCAAGTTC TCCACCCGCC CCGAGGTCCG CGCAGGCTCC GACGCGGTCT GGGACAAGGC CGAGGCCGCG CTGGAGGCCG CGATCCGCAC GGTGACGGAC GATTTCGAAC TCGATCCGGG CGAAGGCGCG TTCTACGGGC CGAAGCTCGA CTTCAAGCTC ACCGACGCCA TCGGCCGCGA ATGGCAGCTG GGCACCTTCC AGGCCGATTT CGTGCTGCCG GAACGGCTCG ATGCCACCTA TATCGGCGAG GACGGCGCGA AACACCGCCC CGTCATGCTG CACCGCGCGA TCCTGGGCTC CTTCGAGCGG TTCCTCGGCA TCCTGATCGA GAACTTCGCA GGCAAGCTGC CCTTCTGGCT CGCCCCGCGC CAGGTGGTCG TCGCCTCGAT CATCTCCGAG GCCGATGATT ACGTGCGCGA GGTGGTGGCG GCCCTCACCC GGGCGGGCAT CCGCGCCGAG GCCGACATCC GCAACGAGAA GATCAACTAC AAGGTGCGCG AGCACAGCGT CGGCAAGGTG CCCGTGATCC TCGCCGTGGG CCGCCGCGAG ATGGAGGAAC GCACCGTCAC CCTGCGGCGG CTGGGCGAAA AGCAGACCTC GGTCGTGGGC CTCGATGCGC TGGTGGCGGA TCTTGCCGCC GAAGCGACCC CGCCGGACCA GCGCCCGGAT CAACCCGCCG TCTGA
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Protein sequence | MAQISLTFPD GNARDFDAGV TPAEVAASIS TSLGKKAISA TVNGAHHDLQ WPIDADASIA IHTLKDDAQA LELIRHDCAH IMARAVQEIW PDVKVTIGPV IENGFYYDFD RAEPFTPEDL GAIEAKMKEI INARDPVRTE VWDRPRAIAH YEANGEPYKV ELIEAIPGNE PLRMYWHGDW QDLCRGPHLQ HTGQVPADSF KLMSVAGAYW RGDSSRPMLQ RIYGVAFQNR DALKKHLHML EEAAKRDHRK LGREMNLFHM QEEAPGQVFW HPNGWTVYTT LQDYMRRRQR ENGYVEVNTP QVVDRKLWEA SGHWDKYQEN MFIVEVDEEH AREKAINALK PMNCPCHVQV YNQGLKSYRD LPLRMAEFGA CNRYEPSGAL HGLMRVRGFT QDDAHIFCTE DQIQDETARF IRMLSTIYRD LGFESFDIKF STRPEVRAGS DAVWDKAEAA LEAAIRTVTD DFELDPGEGA FYGPKLDFKL TDAIGREWQL GTFQADFVLP ERLDATYIGE DGAKHRPVML HRAILGSFER FLGILIENFA GKLPFWLAPR QVVVASIISE ADDYVREVVA ALTRAGIRAE ADIRNEKINY KVREHSVGKV PVILAVGRRE MEERTVTLRR LGEKQTSVVG LDALVADLAA EATPPDQRPD QPAV
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