| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0769 |
|---|
| Symbol | csp1 |
|---|
| ID | 5711204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 776205 |
|---|
| End bp | 776414 |
|---|
| Gene Length | 210 bp |
|---|
| Protein Length | 69 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641266677 |
|---|
| Product | cold-shock DNA-binding domain protein |
|---|
| Protein accession | YP_001532115 |
|---|
| Protein GI | 159043321 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.218929 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACTG GCACCGTGAA GTGGTTCAAT ACAACCAAGG GTTACGGGTT CATCGCACCC
GACGAAGGCG GCAAGGATGT GTTCGTGCAT ATCTCGGCCG TGGAACGGGC CGGCCTGACG
GGCCTGGCCG ACAATACCAA GATCGAATAT GAGCTCAGGG AAGGCCGAGA CGGCAGGTCC
TCCGCGACCG AATTGAAGGT CGTGGGCTGA
|
|---|
| Protein sequence | MPTGTVKWFN TTKGYGFIAP DEGGKDVFVH ISAVERAGLT GLADNTKIEY ELREGRDGRS
SATELKVVG
|
|---|
| |