| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0753 |
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| Symbol | nicO |
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| ID | 5711188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 763625 |
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| End bp | 764581 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641266661 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_001532099 |
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| Protein GI | 159043305 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000315045 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.331019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCCC TAGGCGCGGG CGCGGCGCTG CTGCTGCTGG GGGGTCTGGC CTTCCTGCTC
TGGGGCGGGG GCGGCGACGG GATCGCGCGC TGGGCCGCGA GCCAGCAGCG CGAGGTGCAG
GACGCGCTGG CGGGGCAGTT GCGCGCGCTG CGGGTCGGCG AGGCGGGCGC GCTTGCGGGG
TTCCTGGGGG TCTGTTTCGC CTATGGTTTC TTTCATGCGG CTGGGCCGGG GCACGGCAAG
GTGGTGATCG GCGGCTACGG CGTGGCGCGG CGGATCTCGA TGCTGCGGCT GTCGGGGGTG
GCGTTGATCG CGAGCCTCGG GCAGGCGGCC ACGGCGATCG TTCTGGTGGG CGTGGGCGCC
TGGGTGTTCC AGGCGAGCAC GGCGCAGTTG ACGGGCGTGG CCGACGACTG GTTCGCGCCG
GCGAGTGCGG CGGCGATCCT GGTGCTGGGC CTGTGGCTGG TCTGGCGCGG GGTGGCGCGG
TTGCGCGCGG CGCGGCGGGT CGAGGCCCAT CACCATGACC ATCACGACCA TCACCATGGG
CACGACCACG ATCACGACCA CGATCACGAC CATGGCCACG GCGACGGGGC TTGCGAGACC
TGCGGTCATG CCCATGCGCC CGACGCGAGC GCGGTGCTGG CGGCGCGGGG CCCGCGGGAG
ATCCTGGCCC TGATCGGGGC GGTGGCGATC CGGCCCTGTA CCGGCGCGCT CTTCGTGCTG
ATCCTGGGGC TGCGGTTGCA GATCGAGGCG GCGGCGGTGG CCGGTGTGGT CGCCATGGCG
CTGGGCACGG CGAGCGTGAC CGTGGCGGTG GCCGTGGCGG CGACGGGGCT GCGCGAGAGC
AGCGCGCTGG CCTCCGGCGG CTGGAGCCAG GCGCGGCACC TGGGCAGCGT GCTGGAGATC
GGGGCGGGGG TGCTGGTGGC GCTGCTGGCC TGGGGCCTGT TGCAGGCGGG GATGTAG
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| Protein sequence | MRALGAGAAL LLLGGLAFLL WGGGGDGIAR WAASQQREVQ DALAGQLRAL RVGEAGALAG
FLGVCFAYGF FHAAGPGHGK VVIGGYGVAR RISMLRLSGV ALIASLGQAA TAIVLVGVGA
WVFQASTAQL TGVADDWFAP ASAAAILVLG LWLVWRGVAR LRAARRVEAH HHDHHDHHHG
HDHDHDHDHD HGHGDGACET CGHAHAPDAS AVLAARGPRE ILALIGAVAI RPCTGALFVL
ILGLRLQIEA AAVAGVVAMA LGTASVTVAV AVAATGLRES SALASGGWSQ ARHLGSVLEI
GAGVLVALLA WGLLQAGM
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