| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0745 |
|---|
| Symbol | |
|---|
| ID | 5711180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 753664 |
|---|
| End bp | 754239 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641266653 |
|---|
| Product | redoxin domain protein |
|---|
| Protein accession | YP_001532091 |
|---|
| Protein GI | 159043297 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGTC AGCACGGCTT TGAAATCGAG TGGTCGGAAC TGCCCAAACC CGTCGATGAC
GGGGCGGCGG CGCATCTGCC GGGCATGGTC TTGCCTGCCG TGGCGCTCCC CTCGACGGGC
GGCGGCACGG TGGCGCTGGA CCGGCTGACG GGCACCGCGG TGCTCTATGT CTATCCCATG
ACCGGCACTC CCGGCGTCGC CCTGCCCGAA GGGTGGAACG ACATCCCCGG CGCCCGGGGC
TGCACCCCGC AATCCTGCGC CTTTCGCGAC CATTTCGCGG ATCTCCAGGC CGCTGGCGCA
GCCCATGTCT TCGGGATCTG CACCCAGTCG CCCGTGGATC AGGCGGCGGC TGCGGCGCGG
CTGCACCTGC CGTTCCCGCT GCTGTCGGAT GCCGCCGGTG CCCTGACCCG CGCCCTGCGC
CTGCCCACGT TCGAGGCCGA TGGGATCACC TGCCTCAAGC GGCTGACCCT GATCGCACGC
GACGGGTGGA TCGCCACGTG TTTCTACCCG GTCTTTCCGC CGGACCGGAA CGCGGCGGAG
GTCGAAAGCT GGCTCAAGGC CGCGCCAAAC CGCTGA
|
|---|
| Protein sequence | MTGQHGFEIE WSELPKPVDD GAAAHLPGMV LPAVALPSTG GGTVALDRLT GTAVLYVYPM
TGTPGVALPE GWNDIPGARG CTPQSCAFRD HFADLQAAGA AHVFGICTQS PVDQAAAAAR
LHLPFPLLSD AAGALTRALR LPTFEADGIT CLKRLTLIAR DGWIATCFYP VFPPDRNAAE
VESWLKAAPN R
|
|---|
| |