Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0744 |
Symbol | proS |
ID | 5711179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 752138 |
End bp | 753475 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641266652 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_001532090 |
Protein GI | 159043296 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGT CCCGCTACTT CCTGCCCGTG CTCAAGGAAA CCCCCGCCGA GGCCCAGATC GTCAGCCACC GGCTGATGCT GCGGGCGGGC ATGATCAAGC AGGCCAGCGC GGGGATCTAT TCCTGGCTGC CGCTGGGCTA CAAGGTGCTG CGCCGGATCG AAGAGATCGT GCACGAGGAA CAGCAGCGCG CGGGCCATAT CCCCATGCTG ATGCCCACCC TGCAATCGGC CGACCTGTGG CGCGAGAGCG GACGCTACGA CGATTACGGC CAGGAGATGC TGCGCATCAC CGACCGGCAC GGGCGCGACA TGCTCTACGG GCCCACGAAC GAGGAACTGA TCACCGATAT CTTCCGGTCG AACGTGGGAA GCTACAAGGA CCTGCCGCTG ACGCTCTATC ACATCCAGTG GAAATTCCGC GACGAGGTCC GGCCCCGGTT CGGCGTGATG CGCGGGCGCG AGTTCCTGAT GAAGGACGGG TATAATTTCG ACCTAACCAA GGAGGCGGCG CTGCACGCCT ATAACCGTCA CCTGGTCAGC TACCTGCGCA GCTATGAACG GATGGGGCTG CAGGCGATCC CGATGCGCGC TGATGGCGGC CCGATCGGCG GGGATTATAC CCACGAATTC CTCGTGCTGG CCGAGACCGG CGAGAGCGAG GTTTTCTACG ACGCCGAGAT CACGGATCTC AGCTTCGGCG ACCGACAGAT CGACTATGAC GATGTGGGCC AGTGCCAGGC GGTGCTGGAG GAGTTCACTT CCCGCTACGC CCGCACGGAC GAGACCCATG ACCCGGACGC CTTCGCCAAG GTGCCGGAGG CGCGACGCCG CTCCGCGCGC GGGATCGAGG TCGGGCAGAT CTTCTATTTC GGCACCAAGT ATTCCGACGC CATGGGCGCC ACGGTGATCG ACAAGGACCA GAATCAGGTG CCGGTGCACA TGGGCAGCCA CGGGATCGGG GTCAGCCGCC TGCTGGGCGC GATCATCGAG GCAAGCCATG ACGACAAGGG GATCATCTGG CCCGAAGGGG TGACGCCGTT CCATTGCGGG ATCGTGAACC TCAAGCAAGG CGATGCCGCG GCGGATGCGG CCTGCGAAGG GCTCTATGAC GCGCTGACCA AGGCGGGGCT GGAGCCGCTC TATGACGACC GGAACGAGCG GGCGGGGGGC AAGTTCGCCA CCATGGACCT CATCGGCCTG CCCTGGCGGA TCACCGTGGG GCCGCGCGGG CTGAAGGCCG GGGTGGTCGA GCTGACCAGC CGCAAGACCG GCGAGAGCGA GGAGCTGTCG CCCGAAGCTG CGGTGGCCAA GGTCGTGGCG CGCTACGCAG GGGCCTGA
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Protein sequence | MRLSRYFLPV LKETPAEAQI VSHRLMLRAG MIKQASAGIY SWLPLGYKVL RRIEEIVHEE QQRAGHIPML MPTLQSADLW RESGRYDDYG QEMLRITDRH GRDMLYGPTN EELITDIFRS NVGSYKDLPL TLYHIQWKFR DEVRPRFGVM RGREFLMKDG YNFDLTKEAA LHAYNRHLVS YLRSYERMGL QAIPMRADGG PIGGDYTHEF LVLAETGESE VFYDAEITDL SFGDRQIDYD DVGQCQAVLE EFTSRYARTD ETHDPDAFAK VPEARRRSAR GIEVGQIFYF GTKYSDAMGA TVIDKDQNQV PVHMGSHGIG VSRLLGAIIE ASHDDKGIIW PEGVTPFHCG IVNLKQGDAA ADAACEGLYD ALTKAGLEPL YDDRNERAGG KFATMDLIGL PWRITVGPRG LKAGVVELTS RKTGESEELS PEAAVAKVVA RYAGA
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