Gene Dshi_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0736 
Symbol 
ID5711171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp743285 
End bp743770 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content70% 
IMG OID641266644 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001532082 
Protein GI159043288 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0316005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCC CGGCGACGCA GGACGACGCG GCGCAGATCG CGGCCCTCTG GTCCGCCCTG 
ATCCGGGACA CGACGGTCAC CTTCAACAGC CACGAGAAGA CCGCTGCCGA CATCACAGCG
CTGCTGGCCG ACAAGGCCGC CGCCGACCAG CCCTTCCTCG TGGCCCTCCA CGCAGGCCGG
GTCGCGGGGT TTGCCACCTA CGGCCCCTTC CGCAACGGCC CCGGCTACGC CCGCACGATC
GAGCATTCGA TCCTGCTCGA CACCGCGGCG CGCGGGCAGG GGCTCGGCCG CGGGTTGATG
TCCGCCCTGG AGGATCACGC AAGGACGCGG GGCATGCACA CGCTCTGGGC CGGGGTGAGC
GGCGAGAACC CCGCGGGCGT CACCTTCCAC CGTCATCTGG GCTTTGCCGA GGTCGCCACC
CTCCGGGAGG TCGGCTACAA GTTCGGCCGC TGGATCGACC TTGTGCTGAT GTGCAAACGG
CTGTGA
 
Protein sequence
MIRPATQDDA AQIAALWSAL IRDTTVTFNS HEKTAADITA LLADKAAADQ PFLVALHAGR 
VAGFATYGPF RNGPGYARTI EHSILLDTAA RGQGLGRGLM SALEDHARTR GMHTLWAGVS
GENPAGVTFH RHLGFAEVAT LREVGYKFGR WIDLVLMCKR L