Gene Dshi_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0725 
Symbol 
ID5711160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp732437 
End bp733432 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content69% 
IMG OID641266633 
Producthypothetical protein 
Protein accessionYP_001532071 
Protein GI159043277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.391938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCG CGATGACATA TCCTGCGCGT TTTGCGCCGG ACCGAGGGAT AATGAGGCGT 
ATCTTGGACG TTATTTTGCA TGTGGGCGCC CATCGGACGG GCACGACAAG TTTGCAACAG
ACGCTGCGGC GCAATGCCTC GCGGTTGCGG GCGAGTTCGG TCGCGGTATG GGAGCCGAAT
GTCACCCGTG CGGCGCTCTT CGATGGGCTG GTCAAGGCTG CCGACCGGGT CACGCCGCAG
GTGGCCGCGC AGGCCCGGGT ATCCAGCGCG CGGGTGCGCG GCGAAATCGA CCGGCTGCGC
GGGACCGGAA TGCGGACCCT GATCGTGAGC GAAGAGAACA TGCTGGGCGC GATCCCGGCG
TGCGTGGCCA GCGGGCAGCT TTACCCGGAT GCGGCACGGC GTATGGCGCG CTTCCGCCCG
GCCTTCGGCG CGCAATGCAC GCGGATCGGC CTCGCCATCC GCAATTACGA ACGGCACTGG
ACCTCGATGC TCGGCTTCAC GGTCAAGCAT GGCGGACGGG TGCCCGACCG CGACCGTCTG
GGCGCGCTGG TGGACCAGCC TCGCCGCTGG CGCGACGTGA TCCGGGAGTT GCAGGTGGTG
TTCCCCAGGG CCGAACTGGT GGTCTGGCCC TTCGAGGCGC TGGTGGATGT GCCACATCTG
CTGGTCCCGG GGCTGACGCG GCGGGTGTTG CCCGCCCCGC TCGAGCCTGT GCCCTGCATC
CACAACGCGT CGCCGGATGT GGCGCTCCTG CGCAAGGTGG TGGCCGAGGG CCCGTGCCCG
CATCACCTAG CGCGCCTGCC GGAGGCAGGG CCCTGGCGCC CCTTCTCCGC GGCGCAGATC
GCGCGGATGC GGGCGGCCTA TGACGACGAG ATCGCATGGC TGCGCTCAGG TGCCGCCGGC
GCGGTCACCT ACATAGAGAG CCCCGAGTGC ATCGCGGGCC TGACAGGACC AGAAAGAGGA
GTGGACCATG ACGAAAGGCA AAGACGCGTG GGCTGA
 
Protein sequence
MSLAMTYPAR FAPDRGIMRR ILDVILHVGA HRTGTTSLQQ TLRRNASRLR ASSVAVWEPN 
VTRAALFDGL VKAADRVTPQ VAAQARVSSA RVRGEIDRLR GTGMRTLIVS EENMLGAIPA
CVASGQLYPD AARRMARFRP AFGAQCTRIG LAIRNYERHW TSMLGFTVKH GGRVPDRDRL
GALVDQPRRW RDVIRELQVV FPRAELVVWP FEALVDVPHL LVPGLTRRVL PAPLEPVPCI
HNASPDVALL RKVVAEGPCP HHLARLPEAG PWRPFSAAQI ARMRAAYDDE IAWLRSGAAG
AVTYIESPEC IAGLTGPERG VDHDERQRRV G