Gene Dshi_0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0714 
Symbol 
ID5711149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp721916 
End bp722884 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content67% 
IMG OID641266622 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_001532060 
Protein GI159043266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGCGGC CACGCGGTAG CGCGCGGCTC TTGCACAGCC CGCGCATTCC GTGGCACGCC 
AACGCCATGA CGGACAGCCA ATCACGGCCC TTGGCGGGGA TGCTCTGGAT GGTCGCCACG
GGGGTGAGCT TCGTGGCGGT CACGGCGCTG GTCAAATCCA TCGGGAGTGA CATTCCAGCC
GCCCAGGCGG CCTTCCTGCG CTACGTGCTG GGGCTGGTGT TCATTTTGCC GGTGCTGGCC
TCGCTGCTGC GGACGCTGCC GTCGCGGGCC AACCTGTCGA TCTTTGCCCT TCGCGGGCTG
ATCCACACCG GCGCGGTGAT CGCCTGGTTC TTCGCCATGA CCCAGATCCC CATCGCCGAG
GTGACGGCGA TGAACTATTT CTCGCCGGTC TACGTGACCA TCGGGGCGGC CCTGTTTCTG
GGCGAGAAGC TGGCCGCAAG GCGGATCGCG GCGATCTGCG TCGCGCTGCT CGGGGCGCTG
ATCATCCTGC GGCCGGGGTT TCGGGAGCTG TCTCCGGGCC ATTTCGCCAT GCTCGGCACG
GCGCTTGGCT TCGCGATCAG CTATCTGTTG GCCAAGCGGC TGGTGCGGGA CCTGTCGCCG
GGGCTGGTGG TGGCGTGGCT GTCGATCTTC GTGTCCATCG GGCTGGCGCC CTTCGCGATT
GCCGTCTGGG TGACGCCGAG CCCTTGGCAC CTCGTGGTGC TGTTCGGCGT CGCCTGTTTC
GCGACGTTGG GACATTACAC CATGACCCGT GCGTTTCAGG CCGCGCCGAT GTCGGTCACC
CAGCCGGTGA CCTTCCTGCA GCTGGTCTGG GCCACGGCGC TGGGTGCGCT GGTCTTCGGC
GAGGCGGTGG ACGGATTCGT GGTGCTGGGC GGCGGTCTGA TCGTGGCGGC GATCTCGTTT
CTGTCCTGGC GCGAGGCGCG GTTGCGCCGG GGGGTGATCA CCCCGTCGGT TTCGGAGCCG
AAAACCTGA
 
Protein sequence
MWRPRGSARL LHSPRIPWHA NAMTDSQSRP LAGMLWMVAT GVSFVAVTAL VKSIGSDIPA 
AQAAFLRYVL GLVFILPVLA SLLRTLPSRA NLSIFALRGL IHTGAVIAWF FAMTQIPIAE
VTAMNYFSPV YVTIGAALFL GEKLAARRIA AICVALLGAL IILRPGFREL SPGHFAMLGT
ALGFAISYLL AKRLVRDLSP GLVVAWLSIF VSIGLAPFAI AVWVTPSPWH LVVLFGVACF
ATLGHYTMTR AFQAAPMSVT QPVTFLQLVW ATALGALVFG EAVDGFVVLG GGLIVAAISF
LSWREARLRR GVITPSVSEP KT