| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0671 |
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| Symbol | rsmC |
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| ID | 5711507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 676410 |
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| End bp | 677411 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641266580 |
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| Product | ribosomal RNA small subunit methyltransferase C |
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| Protein accession | YP_001532018 |
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| Protein GI | 159043224 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAC AACGATTACG GCTGGCCCTG GACGCGGGTC TTCTGGAGTG GCCAGACGGC
CCGGTACTCG CCCTGCGCCC GCCGCCCGGG CTCGAAGGGC TGCCCGAGGA CAGGTTCCAG
ATCGTCCACG GATTTCGCCC CGATGTTACC GCCTGGGAAC GCCGCGGCGC CCTGGTGCAG
CCGCAGGCCG AGGGCGCGTT CGCGACGGCC CTCGTTTGCG TGCCCCGGGC CAAGGACCAT
GCCCGCGCGC TGCTGGCCGA GGCGATCGGC CGGGTCGGGC CCGGCGGGCT GATCGTTCTG
GACGGGCAGA AGACCGACGG CGTCGACAGC CTGGTGAAGC TCGCGAAATC CCTGCTGACG
GGGGTCGAGG TCTATGCCAA GGCCCATGGC AAACTGCTCT GGGGGCGAGT GCCGGACCCC
TTGCCCGATC TGGCGCCGCT GACCCCGCCG CTGACATCGC CCGAGGGCTG GGTGACAGCG
CGCGCGGGGT TTTCCGCCGG GGCGGTGGAT GCGGGCTCGG CGCTGCTGGC GGCCCATCTG
CCCGCGCGGT TGCAGGGCGA CGTGCTCGAT CTCGGGGCCG GGTGGGGGTA TCTGGCCAAG
GCCGCGCTTG CCTCGGGGCA GGTCACCGGC ATGGATCTGG TGGAGGCCGA GTTCGACGCG
CTGGAGGCCG CGCGCCGCAA TGTCGACGAT CCGCGCGCAA GGTTTCTTTG GGAGGACGCG
GCGGTCTTCG CCCCCGGCAA ACGCTACGAC GCGATCCTGT GCAACCCGCC CTTCCACACC
TCGCGCAAGG CCGACCCGGC GATCGGCCAG ATGTTTCTGC GCACGGCCGC GCGGCTCTTG
AAGCCCTCCG GCGTGCTCGG GCTTGTCGCA AACCGGCATT TGCCCTATGA GCACACCCTC
GCCGAGTGTT TCGGCGAAGC CCAGCCCGTG ACCGAGGCGC AGGGCTACAA GATCTTCCAT
GCGCGCAAGC CGCGCCAGAC CGGCGCCGCG CGCGCCTCCT GA
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| Protein sequence | MTAQRLRLAL DAGLLEWPDG PVLALRPPPG LEGLPEDRFQ IVHGFRPDVT AWERRGALVQ
PQAEGAFATA LVCVPRAKDH ARALLAEAIG RVGPGGLIVL DGQKTDGVDS LVKLAKSLLT
GVEVYAKAHG KLLWGRVPDP LPDLAPLTPP LTSPEGWVTA RAGFSAGAVD AGSALLAAHL
PARLQGDVLD LGAGWGYLAK AALASGQVTG MDLVEAEFDA LEAARRNVDD PRARFLWEDA
AVFAPGKRYD AILCNPPFHT SRKADPAIGQ MFLRTAARLL KPSGVLGLVA NRHLPYEHTL
AECFGEAQPV TEAQGYKIFH ARKPRQTGAA RAS
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