Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0661 |
Symbol | fixN |
ID | 5711497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 665449 |
End bp | 667050 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641266570 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_001532008 |
Protein GI | 159043214 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGACT ACGTTAAAAT CGTACTGCTT GGTCTGGTCG CTCTGGCAGC TGCAATCGCT GCCAACTATG CCCGCGATCT GGCCTATCAG GTCCACGCTG TCTTGATCAT GCTCATCGCC GGGGGGATGT TCCTCTGGCA GGTGCGCAAG GTCGACGAAC CAAAGACAGT CAATACCAGT GAATACATGG ACGATGTCGT GCGGTACGGC GTCGTGGCGA CCGCCTTCTG GGGGGTTGTG GGGTTCCTCG CGGGCACGTT CATCGCGTTC CAGCTCGCCT ACCCGCAACT CAACTTCGCC TGGGCGGAAG GATATGCAAA TTTCGGGCGC CTGAGACCGC TGCACACCAG TGCGGTGATT TTCGCGTTTG GGGGCAACGC CCTGATTTGC ACATCTTTCT ACATCGTGCA GCGCACCTCT GCGGCACGTC TCTGGGGTGG CAATCTCGCC TGGTTCGTTT TCTGGGGCTA CAACCTGTTC ATCGTCCTGG CGGCGACGGG CTACCTGCTG GGCGCGACCC AGTCCAAGGA ATACGCCGAG CCCGAGTGGT ACGTGGATAT CTGGCTGACC GTTGTCTGGG TGGCCTACCT GGCGGTGTTC CTCGGCACGA TCATGAACCG CAAGGAAAAG CACATCTACG TGGCGAACTG GTTCCTGCTG AGCTTCATCG TCACGGTGGC GATGCTCCAT CTCGGCAACA ACCTGTCGAT CCCGGTGTCG ATCTTCGGCT CGCGCTCGGT GCAGCTGTTC TCGGGTGTGC AGGACGCGAT GATGCAGTGG TGGTACGGCC ATAACGCGGT GGGCTTCTTC CTGACCGCGG GTTTCCTCGG CATGATGTAC TACTTCGTGC CCAAGCAGGC CGAGCGGCCG GTCTTCAGCT ACAAGCTGTC GATCATCCAC TTCTGGGCGC TGATCTTCCT GTATATCTGG GCCGGTCCGC ACCACCTGCA TTACACCGCG CTGCCGGACT GGGCCTCGAC CCTCGGCATG GTGTTCTCGA TCGTGCTGTG GATGCCCAGC TGGGGTGGCA TGATCAACGG TCTGATGACG CTCTCTGGCG CCTGGGACAA ACTGCGCACC GACCCGGTGA TCCGGATGAT GGTGATCTCG ATCGGTTTCT ACGGCATGTC GACCTTCGAA GGCCCGATGA TGTCGATCCG CGCGGTCAAC TCCCTGAGCC ACTACACGGA CTGGACCATC GGTCACGTGC ACTCCGGGGC GCTGGGCTGG AACGGCATGA TCACCTTCGG CGCGCTCTAC TTCCTGGTGC CGCGCCTGTG GAACCGCGAG AAGCTCTACA GCCTGACCCT GGTCAGCTGG CACTTCTGGC TCGCGACCAT CGGGATCGTC CTCTATGCCT CGGCCATGTG GGTCACGGGC ATCATGGAGG GCCTGATGTG GCGCGAAGTG GATGCGCAGG GCTTCCTCGT GAACTCCTTC GCCGACACCG TGTCCGCCAA GTTCCCGATG TATGTGGTGC GCGGTCTGGG CGGGGTGCTC TACCTGGCCG GTGCAATCAT CATGTGTCTC AACCTGTGGT GGACCGTCAC CCGCGGCTCG GAGAAGAAGT CTCCCGCGGC TGTCGCGACC CCCGCTGAAT AA
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Protein sequence | MWDYVKIVLL GLVALAAAIA ANYARDLAYQ VHAVLIMLIA GGMFLWQVRK VDEPKTVNTS EYMDDVVRYG VVATAFWGVV GFLAGTFIAF QLAYPQLNFA WAEGYANFGR LRPLHTSAVI FAFGGNALIC TSFYIVQRTS AARLWGGNLA WFVFWGYNLF IVLAATGYLL GATQSKEYAE PEWYVDIWLT VVWVAYLAVF LGTIMNRKEK HIYVANWFLL SFIVTVAMLH LGNNLSIPVS IFGSRSVQLF SGVQDAMMQW WYGHNAVGFF LTAGFLGMMY YFVPKQAERP VFSYKLSIIH FWALIFLYIW AGPHHLHYTA LPDWASTLGM VFSIVLWMPS WGGMINGLMT LSGAWDKLRT DPVIRMMVIS IGFYGMSTFE GPMMSIRAVN SLSHYTDWTI GHVHSGALGW NGMITFGALY FLVPRLWNRE KLYSLTLVSW HFWLATIGIV LYASAMWVTG IMEGLMWREV DAQGFLVNSF ADTVSAKFPM YVVRGLGGVL YLAGAIIMCL NLWWTVTRGS EKKSPAAVAT PAE
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