| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0637 |
|---|
| Symbol | |
|---|
| ID | 5712096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 636471 |
|---|
| End bp | 637394 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641266545 |
|---|
| Product | glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_001531984 |
|---|
| Protein GI | 159043190 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.1515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACA ACACCATTCC CGGCCTGCAC CATGTCACCG CGATCTCCGG ACCGCCGCAG
GACAACCTGG ATTTCTTCAC CGGCACGCTG GGACAGCGGC TGGTCAAGAA GACCGTGAAT
TTCGACGCGC CGGACACCTA TCACCTCTAT TACGGCAACG AGACCGCAGA GCCGGGCACG
ATCCTGACCT TCTTCCCCTT CGTGGATGCG GGCCCCGGGC GCGCCGGGCC GGGCATGGCG
AGCGCCTATG CCTACGCCGT TCCCGCAGGC CGGTTCGACG GCTGGATGGC ACGCCTTGCC
GAGGATGCCA TCGACTTCAA CGGCCCCGTT GAGCGGTTCG GCCAGCGCGT GATCACCCTG
CGCGACCCGG ACGGCGCGCC GGTAGAATTG ATCGAGACCG ACCGGGTGGC GCAGGCGCCG
CTGGACGGGT TCCACTCGGT CACCCTGTGG GAGGCCGACC CGGAGCCCAC CGCCAAACTG
CTGACCGAGG TGTTCGGCTA TACCGATGGC GGCACCGAGA CCGGCGAGGG GATCGAACGG
CTGCGACTGG TCGCCCCCGG CGATGCTCGC GGCGCGGTGG TCGACCTGAT CCGCACCGAC
ACCCCGTCCA TCGGGCGGTC CGGGGCGGGC ACGATCCATC ACGTGGCCTT CCGGGCGCAG
GATCACGACA CCCACATGGG CTGGCGTGAG AAACTTCTGG GCCTGGGGCA TGGCTTGACC
CCGGTGATCG ACCGGCAGTA TTTCGACGCG ATCTACTTCC GGGAGCCGGG CGGTGTCCTG
TTCGAGATCG CCACCGACCC GCCGGGCTTC GCCACGGACG AGCCGATGGA GGCCCTGGGC
CGGAAGCTTA TGCTGCCGCC GCAGCACGAG CCGCTTCGCG ACCGGATCGA GCGGGTGCTG
CCGCCGCTCA GGACCGCCGC ATGA
|
|---|
| Protein sequence | MKHNTIPGLH HVTAISGPPQ DNLDFFTGTL GQRLVKKTVN FDAPDTYHLY YGNETAEPGT
ILTFFPFVDA GPGRAGPGMA SAYAYAVPAG RFDGWMARLA EDAIDFNGPV ERFGQRVITL
RDPDGAPVEL IETDRVAQAP LDGFHSVTLW EADPEPTAKL LTEVFGYTDG GTETGEGIER
LRLVAPGDAR GAVVDLIRTD TPSIGRSGAG TIHHVAFRAQ DHDTHMGWRE KLLGLGHGLT
PVIDRQYFDA IYFREPGGVL FEIATDPPGF ATDEPMEALG RKLMLPPQHE PLRDRIERVL
PPLRTAA
|
|---|
| |