| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0630 |
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| Symbol | glpD |
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| ID | 5712089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 627302 |
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| End bp | 628897 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266538 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001531977 |
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| Protein GI | 159043183 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.146837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAA CAGACGCGAA ATTGCACGAC CTCTTCATCA TCGGGGGGGG CATCAATGGT
TGCGGGATCG CGCGCGATGC CGCCGGGCGC GGGCTCTCGG TGGCGCTGGC CGAGATGAAC
GATCTGGCCT CGGGCACTTC GTCGGGGTCC ACCAAGCTCT TCCATGGCGG GCTGCGATAC
CTGGAGTATT TCGAATTCCG GCTGGTGCGC GAGGCCCTGA TCGAGCGGGA GGTGCTGCTG
CGCGCGATGC CCCATATCAG CTGGCCCAAG CGGTTCGTGC TGCCCTATCA CCCGGACATG
CGCTTCGAAG GGCAGACCCC GACCTCGAAA CTGCTGGGCA TTTTCATGCC CTGGATGAAG
GGGCGGCGGC CCGCCTGGCT GATCCGGCTG GGGCTGTTCC TCTATGACAA CCTGGGCGGA
CGGAAGATCC TGCCGGGGAC CGAGACCCTG TCGCTGCAGG GCACGCCCGA AGGCGCACCG
TTGGAGCCGC GGTTCGAGAA GGCGTTCGAG TATTCCGACT GCTGGGTGGA GGATTCGCGT
CTGGTGGTCC TGAACGCGCG CGATGCGGAG GCGCGCGGGG CGGAGATTCA CATGCGCACC
AAGGTCGTCG CGACCGAGCG GCATGCCGAT CACTGGCGGA TCGAGACCCA AGAGGCCGAC
ACCGGCACGC GGCGCAGTTT CCGGGCGAAG ATGCTGGTGA ACGCAGGCGG GCCCTGGGTC
GCCGAACTGC TGACCGGGAC CCTGCGGCTG AACGTGCCGG ACACGGTGCG GCTGGTGCGG
GGCAGTCACA TCGTGGTGCC CAAGCTCTAT GACCACGACA AGTGCTACTT CTTCCAGGGG
ACCGATGGGC GGATCATCTT CGCGATCCCC TACGAGACGG ATTTCACCCT GATCGGCACC
ACCGATGCGG AGCATCCGGA CCCCTCGCAG AAGCCCGAAT GCACGCCGGA GGAGCGCGAC
TACCTGCTGG CCTTCGCGAA CCAGTATTTC AAGCAGGACA TCACGGCCGA GGACGTGGTC
TGGACCTATT CCGGGGTGCG GCCGCTTTAT GATGACGGCG CGAGCAGCGT GACGGCGGCG
ACGCGGGATT ACACGCTCAA GACCGATGCC GCGGCCGGGG CGCCGGTGCT GAACGTGTTC
GGCGGCAAGA TCACCACCTA TCGGCGGCTG GCGGAAAGCG CGTTGGCGCA GATCGGCGCG
CAGCTGCCCG TCGGCGCGGG GCCGTGGACC GCCGGCGTGG CACTGCCCGG GGGCAATTTC
CCGGTGGACG GGGTCGAGGA GCTGATCGCG CAGCTGCGCG CGGCCTATCC GTTCCTGAGC
GCACGGTGGG CGACGCGGCT GATCCGCGCC TATGGGCGCG ACGCGTGGGA GGTGCTGGGC
GACGCGAAGA CCGAAGCCGA TCTGGGCGAG GGGTTCGGCG CGACCCTGAC CGCGCGGGAG
GTGCGCTGGC TTATGACGCG CGAATATGCG CGGCAGGCCG AGGACGTGGT CTGGCGGCGC
AGCAAGCTGG GCCTGCGGAT GAGCGCCGAA GAGATCGTAA CGCTGGACCG CTGGATGCAG
GCAGCGCGCC GCACCCTGCC GCAATCGGCC GCATAA
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| Protein sequence | MPETDAKLHD LFIIGGGING CGIARDAAGR GLSVALAEMN DLASGTSSGS TKLFHGGLRY
LEYFEFRLVR EALIEREVLL RAMPHISWPK RFVLPYHPDM RFEGQTPTSK LLGIFMPWMK
GRRPAWLIRL GLFLYDNLGG RKILPGTETL SLQGTPEGAP LEPRFEKAFE YSDCWVEDSR
LVVLNARDAE ARGAEIHMRT KVVATERHAD HWRIETQEAD TGTRRSFRAK MLVNAGGPWV
AELLTGTLRL NVPDTVRLVR GSHIVVPKLY DHDKCYFFQG TDGRIIFAIP YETDFTLIGT
TDAEHPDPSQ KPECTPEERD YLLAFANQYF KQDITAEDVV WTYSGVRPLY DDGASSVTAA
TRDYTLKTDA AAGAPVLNVF GGKITTYRRL AESALAQIGA QLPVGAGPWT AGVALPGGNF
PVDGVEELIA QLRAAYPFLS ARWATRLIRA YGRDAWEVLG DAKTEADLGE GFGATLTARE
VRWLMTREYA RQAEDVVWRR SKLGLRMSAE EIVTLDRWMQ AARRTLPQSA A
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