| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0615 |
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| Symbol | pyrF |
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| ID | 5712069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 607474 |
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| End bp | 608172 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641266518 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001531962 |
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| Protein GI | 159043168 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCT CGGATGATCG ATTGATCGTG GCGCTGGATG TGCCGAATGC GCTGGCCGGG
CTTGACCTGG CCGCGACGCT TGGGGATGCG GTCGGTTTCT ACAAGATCGG ACTGGGGATG
CTGACCGGCG GCGGGCTGGC CCTGGCCAAC GAGCTGAAGA CCGATCACGG CAAACGCATC
TTCCTGGACA TGAAGCTCTT CGATATCGGC GCCACGGTCG AGGCGGCGGT GCGCGGACTG
GCACAGTTCG ACCTCGATTT CCTGACCGTG CACGGCGATC CCCATGTGGT TCGGGCCGCC
AAGGAGGGGG CGTCAGGCTC GAACATGAAG ATCCTCGCGG TGACGGTGCT GACCTCGCTC
GACCGGCAGG ATCTCGATGC GGGCCTGATC AAGGCGGGGA CGCTCCCCGA CCTGGTGGCC
GAGCGGGCCG GGCGCGCCTT CGCGGCGGGC GCGGACGGCG TGATCGCCTC CCCGCAGGAG
GCCGCCATGA TCCGCGCCCT GCCCGAAGCG ACCGGGCGGC TCATCGTGAC GCCCGGGGTG
CGCCCCGCGG GGGCCGCCCT TGGCGATCAG AAGCGGGTCG CAACCCCGGC GCAGGCGATC
TCGGACGGCG CCGATCACAT CGTGGTCGGG CGCCCGATCT GGCAAGCGCC CGATCCCGCC
GCGGCCGCCC GCGCCATCCG CGACGCGCTG CCCCGCTGA
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| Protein sequence | MPTSDDRLIV ALDVPNALAG LDLAATLGDA VGFYKIGLGM LTGGGLALAN ELKTDHGKRI
FLDMKLFDIG ATVEAAVRGL AQFDLDFLTV HGDPHVVRAA KEGASGSNMK ILAVTVLTSL
DRQDLDAGLI KAGTLPDLVA ERAGRAFAAG ADGVIASPQE AAMIRALPEA TGRLIVTPGV
RPAGAALGDQ KRVATPAQAI SDGADHIVVG RPIWQAPDPA AAARAIRDAL PR
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