| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0565 |
|---|
| Symbol | |
|---|
| ID | 5712018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 553461 |
|---|
| End bp | 554477 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641266467 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001531912 |
|---|
| Protein GI | 159043118 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3489] Predicted periplasmic lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATC TCCTTGTGAC TTTCCTTCTG ACTTGTGCCC CGGTTCTGGC GTTTGCGGAC
GATAATGCCC CGGATATCGA CGGAATTGTC AGCGACCATA TCCTACCACG CTTCGCGATG
CTGTCAGAGA CATCTGCTGA CTTGTCGCAT GCCGCCGCGC AGGAGTGTCG CGCGGACGCG
CCGGAATTGC GCGCGGCCTA TGGCGCGGCA TTCGATGCCT GGATCGCGGC CAGCCATCTG
CGCTTCGGCC CGACCGAAGT GGACGACCGC GCCTTTGCCC TGGCATTCTG GCCCGACAGT
CGCGGCGCAA CCCCGCGCGT GCTGAGCGAT CTGATCGCCA CGGAGGATCC GGTCGCGCAG
GGGGGCGAGA CCTATTCCGA CGTCTCGATC GCTGCGCGGG GGTTCTACGC ACTGGAATTC
CTGCTCTATG ACCCCGGGCT GAGCACCGTC GGCAATGCCG ATTTTCGATG CACTCTCGTT
CGGACGATAA CGGCCGATAT TGCCGCAACC GCCGCCGCAA TTCTGGCAGA TTGGGAAACC
CGGTACGCAG ACCTGTTGCG CACCCCGCGA GCCGATGGGG TGTATCGCAC CGAACAGGAA
GCCTTGCAGG AGATGTTCAA AGCGGTGACC ACGGGCCTGC AATTCACCGC CGACACCCGC
CTCGGGCGCC CCCTCGGTAC GTTCGAGCGC CCCCGCCCGA TGCGGGCCGA GGCGCGCCGG
TCCGGTCGGT CGGCGCGCCA TGTGGCCATC AGTCTTGCGT CGGTCGAGGA TCTGGCGCTG
CGTCTTGCCA CCGGCAACGC CGCTTTGAGA GAGCGGCTTG GGGACCAGTT CGCCCGTGCA
CAGTCGCGGC TGAAGGCGCT GGATGATCCC ATCTTTGCCA GTGTGACGGC GCCGCAAACG
CGCCTCAAAG TCGAAGTGAT CCAGCAATCG GTCAACGAAA TCCGTAGCAC GGTGTCTGAC
CGACTTGGCC CGAAGATCGG GGTCTACGCC GGGTTCAACG CCCTGGACGG GGACTGA
|
|---|
| Protein sequence | MKHLLVTFLL TCAPVLAFAD DNAPDIDGIV SDHILPRFAM LSETSADLSH AAAQECRADA
PELRAAYGAA FDAWIAASHL RFGPTEVDDR AFALAFWPDS RGATPRVLSD LIATEDPVAQ
GGETYSDVSI AARGFYALEF LLYDPGLSTV GNADFRCTLV RTITADIAAT AAAILADWET
RYADLLRTPR ADGVYRTEQE ALQEMFKAVT TGLQFTADTR LGRPLGTFER PRPMRAEARR
SGRSARHVAI SLASVEDLAL RLATGNAALR ERLGDQFARA QSRLKALDDP IFASVTAPQT
RLKVEVIQQS VNEIRSTVSD RLGPKIGVYA GFNALDGD
|
|---|
| |