| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0563 |
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| Symbol | irpA |
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| ID | 5712016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 550566 |
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| End bp | 551828 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641266465 |
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| Product | iron-regulated protein |
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| Protein accession | YP_001531910 |
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| Protein GI | 159043116 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3487] Uncharacterized iron-regulated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGAC TGCCCCACCT TTCCACAGCG CTCGCGCTGG TGCTTGCGAC GCCTGCCTTC
GCCACAGAAC CCGCAGAGGT TCTGGATCAC TACGCGGACA TGGCCGTGGC CAAGTACGAA
GACAGCCTGA TCACTGCACA GCGACTGCAA GCGGCGGTCG ACGCCCTCGT TTCGACGCCT
TCTGCCGAGG CTCTGACCGC TGCGCGTGCG GCGTGGCTTG CTGCGCGCGT CCCCTATCAA
CAGTCCGAGG TTTACCGGTT CGGAAACGCC ATCGTCGATG ATTGGGAAGG CAAGGTGAAC
GCCTGGCCGC TGGATGAGGG GCTGATCGAC TATGTGGACG CCTCTTACGG CGGGCCGACC
GACGAGAACG CGTTTGCCTC CCTCAATGTG ATTGCAAGCC CGACTTTCAC GCTGTCGGGC
GCGGAGGTTG ACGCGACCGA GATCACGCCG GCTCTTCTGG AAGAAACGCT GCACGAGGCG
GACGGGGTCG AGGCAAACGT GGCCACCGGG TATCACGCCA TCGAATTCCT GCTCTGGGGA
CAGGATCTGA ACGGTCACGG TGCCGGGCCA GGCGACCGGC CCTGGACCGA TTATGCTCCG
GGGGACGATT GCACCAATGG CAACTGCGAC CGACGCGGGG CGTTCCTGAA GGCGGCGACC
GACCTTCTGG TATCCGATCT GGAATGGATG GTGGCACAAT GGGCCGATGA CGGGGCCGCG
CGGGCTGAAC TGACCGCCGA TGCGGAGGCC GGGATCGCCG CGATCTTGAC GGGCATGGGG
TCGCTTTCAT ATGGCGAAAC GGCGGGGGAG CGGATGCGGC TTGGCGTCAT GCTGAACGAT
CCCGAAGAGG AACATTCCTG CTTTGCCGAC AATACCCATA ACGATCACTT CTATAACGGC
ATCGGCATCC AGAACGTCTA TCTCGGAGAG TATGTCCGCG TCGATGGCAC GCTGGTCTCG
GGGCCGGCCC TGTCCGATCT GGTGGTGGCG GCCGATCCGG CACTCGATGC CGAGATGCAG
GGCAAGCTGG CCATGGCCGT GATGCAATTG GGACGGATCA AGACCGCCGC CGAAGCCGGG
TTTGCCTATG ACCAGATGCT GGAGCAAGGC AATGCCGCGG GCGAGGCGTT GATCATGGGC
GGGGTGAACG GACTCGTGGA TCAGACAAGG TCGATCGAGC GGGTCATCGC CGTGTTGAAT
GCCGAAGGGA TCGAGATCGA AGGCTCCGAC AGCCTCGACA ACCCGAGCGC TGTGTTCGAG
TGA
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| Protein sequence | MTRLPHLSTA LALVLATPAF ATEPAEVLDH YADMAVAKYE DSLITAQRLQ AAVDALVSTP
SAEALTAARA AWLAARVPYQ QSEVYRFGNA IVDDWEGKVN AWPLDEGLID YVDASYGGPT
DENAFASLNV IASPTFTLSG AEVDATEITP ALLEETLHEA DGVEANVATG YHAIEFLLWG
QDLNGHGAGP GDRPWTDYAP GDDCTNGNCD RRGAFLKAAT DLLVSDLEWM VAQWADDGAA
RAELTADAEA GIAAILTGMG SLSYGETAGE RMRLGVMLND PEEEHSCFAD NTHNDHFYNG
IGIQNVYLGE YVRVDGTLVS GPALSDLVVA ADPALDAEMQ GKLAMAVMQL GRIKTAAEAG
FAYDQMLEQG NAAGEALIMG GVNGLVDQTR SIERVIAVLN AEGIEIEGSD SLDNPSAVFE
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