| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0546 |
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| Symbol | ugpC2 |
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| ID | 5711999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 532894 |
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| End bp | 533910 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641266448 |
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| Product | ABC-type sugar / sn-glycerol-3-phosphate import ATP-binding protein ugpC |
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| Protein accession | YP_001531893 |
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| Protein GI | 159043099 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGGCA TCAAGATCGA CAAAATCAAT AAGTTCTACG GGACGACCCA GGCGCTTTTC
GACATCAACC TCGACATAGA GGACGGTGAG TTCGTCGTCT TTGTCGGCCC GTCTGGCTGC
GGCAAGTCCA CGTTGCTGCG CACGCTGGCG GGACTGGAAG GCGTCAGCTC CGGCCGTATA
GAGATTGGTG GGCGCGATGT CACGACGGTC GAGCCTGCCG ATCGCGACCT TGCGATGGTA
TTCCAGTCCT ACGCGCTCTA TCCGCACATG ACCGTGCGAG AGAACATGGA ATTCGGGATG
AAGGTCAACG GGTTCGAACC GGACCTGCGC AAGGAACGCA TCGCGGAAGC CGCGCGCGTG
TTGCAACTGG AAGATTATCT CGACCGCAAG CCCGGTCAGT TGTCCGGGGG GCAGCGCCAG
CGGGTTGCGA TCGGGCGCGC GATCGTGAAG AACCCCAGCG TTTTCTTGTT CGATGAGCCT
CTTTCGAACC TAGATGCTAA GCTGAGGGTG CAGATGCGGG TGGAGCTTGA AGGACTCCAC
AAGCAGTTGG GCGCGACCAT GATCTACGTC ACACACGACC AGGTCGAAGC CATGACCATG
GCCGACAAGA TCGTGGTCTT AAACCGCGGC CGCATTGAAC AGGTCGGTTC CCCCATGGAC
CTCTACCACA AGCCAAATTC TCGATTCGTC GCGGAGTTTA TCGGCTCGCC AGCGATGAAT
GTCTTCTCTT CCGATGTGGG ATTACAGGAC ATTTCTCTCG ATGCATCGGC GGCCTTTGTG
GGCTGCCGCC CCGAACATAT CGAGATCGTT CCTGACGGCG ATGGTCACAT CGCCGCCACG
GTGCATGTCA AGGAGCGCCT CGGGGGCGAG AGTCTGCTCT ACCTCGGTTT GAAAGGTGGC
GGCCAGATTG TCGCCCGCGT TGGTGGCGAC GATGAAACAA AGGTTGGTGC AGCTGTCAGT
TTGCGCTTCT CGCGACACAG GTTGCACCAG TTTGACGAGG CGGGCAGAGC CATTTAA
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| Protein sequence | MAGIKIDKIN KFYGTTQALF DINLDIEDGE FVVFVGPSGC GKSTLLRTLA GLEGVSSGRI
EIGGRDVTTV EPADRDLAMV FQSYALYPHM TVRENMEFGM KVNGFEPDLR KERIAEAARV
LQLEDYLDRK PGQLSGGQRQ RVAIGRAIVK NPSVFLFDEP LSNLDAKLRV QMRVELEGLH
KQLGATMIYV THDQVEAMTM ADKIVVLNRG RIEQVGSPMD LYHKPNSRFV AEFIGSPAMN
VFSSDVGLQD ISLDASAAFV GCRPEHIEIV PDGDGHIAAT VHVKERLGGE SLLYLGLKGG
GQIVARVGGD DETKVGAAVS LRFSRHRLHQ FDEAGRAI
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