| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0545 |
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| Symbol | |
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| ID | 5711998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 532144 |
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| End bp | 532884 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641266447 |
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| Product | HAD-superfamily hydrolase |
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| Protein accession | YP_001531892 |
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| Protein GI | 159043098 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCC CGCGAAAGCT CCGCCTACCG CAGACCTGCA CGGACCTGTT TGGCGATGTG
GATCTGGTCA TCTTCGACTT CGACGGAGTG ATCGCTGACA GCGAGGTTAT CTCCCTTGCC
ACTCTACAAG CGTCTCTAAA GGCCTTCGGG ATGGACCTCA CGATTGAAGA GATCCGCCAG
AAGTTCCTGG GAAAATCACT CAAGACGATT TCGACCTATG TGGATCAACA CAGCTCATCG
CAGGCCGCAG CGGACTTTGG TAATGCCTGG CAGGCAGAGC TTTACAGCAG GTTCCGCGCA
GAACTGAAGC CGCTGCCGCA TCTTGAGAAG CTACTGTTCG AACTCGCCGA GACCGCCACG
CGGTTCTGCA TCGCGTCCAG CGGCACGTTC GAAAGGATCA ATGTCGCCCT GTCTGCCATG
AGCATGTCGG ATTGCTTCGA TCACGTCTTC AGTTCAGAAC AAGTCTCGCG CGGCAAACCG
GCGCCGGACC TGTTCCTCAT GGCGGCCGAA GCGCTGGACG TAAGTCCGTC CAGGTGCCTG
GTCATCGAAG ACTCTCTCTA CGGGATTCGC GCAGCCAAGG CCGCTGGCAT GCGCGGGGTC
GGCTTTCTCG GTGGCGCACA CCTGCAAGGC ATCGTCGAGC AACACGGGAA AACGTTACTG
GAGAACGGCG CGGATATGAT CCTCGCCTCC CATCAAGACA TCGCGGCGCG CCTGGCACCC
AAGCGCACGC AGCAGAACTG A
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| Protein sequence | MNTPRKLRLP QTCTDLFGDV DLVIFDFDGV IADSEVISLA TLQASLKAFG MDLTIEEIRQ
KFLGKSLKTI STYVDQHSSS QAAADFGNAW QAELYSRFRA ELKPLPHLEK LLFELAETAT
RFCIASSGTF ERINVALSAM SMSDCFDHVF SSEQVSRGKP APDLFLMAAE ALDVSPSRCL
VIEDSLYGIR AAKAAGMRGV GFLGGAHLQG IVEQHGKTLL ENGADMILAS HQDIAARLAP
KRTQQN
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