| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0501 |
|---|
| Symbol | |
|---|
| ID | 5711417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 485653 |
|---|
| End bp | 486264 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641266405 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001531850 |
|---|
| Protein GI | 159043056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATC CCGAAGCGAG CAGACTAAGC CGCTGGTCGC GCAGAAAGCT CGAGGCGAAG
CGCCAGGCCG AAGTTGCCGA TGAGGTGGCC GACACAGCAG CGGTCGACGC CGTGGACGCG
GTCGAGGAGG ACCCGGACCT GATCGCGGCG CTGCCCTCGC TGGACGAGAT CGAGGTCGGG
TTCGACATGA CGCCCTTTCT GGCCAAGGGC GTTCCGGCGC ACCTGAAGAA CGCGGCGTTT
CGCAAGTTGT GGCAGGCCAG CCCGGCGGTG CGCGATTACC TCGATCCTGC CGTGGACTAC
GCCTGGGACT GGAATGCGCC CGGCGGCGTG CCTGGCGGCG GCGGGGCGTT GTCGGAGCAA
AGCGTGGCCA AGATGGTCAA GGGGCTCATT GGCGAGCGGT CCGACGATGC GGAGGAGTTG
ATTGCCGAGG ACACGACAGG GGAGGAGGCC GACCCTGCCC CCGAAACCGA TCAGCCCGAA
GCATCACCAG TTGCGGTGCG GCGGGACACG CCATCTGAGC CGGAACACAA GGAAAAACCA
GACGCGCCGC GCGCCTTTGA TCGCGTGGCT CAGTTGCCGC TGCGTCGCCA TGGAGGCGCC
ATGCCGGAAT AG
|
|---|
| Protein sequence | MTDPEASRLS RWSRRKLEAK RQAEVADEVA DTAAVDAVDA VEEDPDLIAA LPSLDEIEVG
FDMTPFLAKG VPAHLKNAAF RKLWQASPAV RDYLDPAVDY AWDWNAPGGV PGGGGALSEQ
SVAKMVKGLI GERSDDAEEL IAEDTTGEEA DPAPETDQPE ASPVAVRRDT PSEPEHKEKP
DAPRAFDRVA QLPLRRHGGA MPE
|
|---|
| |