| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0495 |
|---|
| Symbol | |
|---|
| ID | 5711411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 480087 |
|---|
| End bp | 480497 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641266399 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001531844 |
|---|
| Protein GI | 159043050 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.350156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.665979 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTTC TACGACCCCT GACCGCGACG GTTGTCGAGG CGCTGATGCC AACCCTCGCC
CTCGGCCAAT CCGCCACCCC GGGCACCACC ATCGAACTGG AACCGATCGT CATCGACGGC
ACCAGTGGCG CTCTGGCCAC CGCCGAAGAG CGGCAGCGCG ACACCCCGGG CGGCACGGAC
CTGCTGCGCG CAGAGACTTA CCGCGACAAG GCGACCGTCA CCTTGTCGGA CGTGCTCGAT
GGTGCGCCGG GCGTGGTGGT GCAGGATTTC TTCGGCGGGT TCGATCAGCC CGCGTCCAGA
AGCGCGCCTC GGCCCCGCGA CAGAATCCTG TCGAGGTGGC GTTCTGTTCC TGCAGGATGG
TCTGCCGCTG AACGGAGCTG TCGCTTCCTA GGGGTAGGAC CGATTGATTA G
|
|---|
| Protein sequence | MLLLRPLTAT VVEALMPTLA LGQSATPGTT IELEPIVIDG TSGALATAEE RQRDTPGGTD
LLRAETYRDK ATVTLSDVLD GAPGVVVQDF FGGFDQPASR SAPRPRDRIL SRWRSVPAGW
SAAERSCRFL GVGPID
|
|---|
| |