Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0490 |
Symbol | |
ID | 5711406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 475571 |
End bp | 475996 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641266394 |
Product | protein of unknown function DUF454 |
Protein accession | YP_001531839 |
Protein GI | 159043045 |
COG category | [S] Function unknown |
COG ID | [COG2832] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000104879 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.570188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGGGT CGGTGGGCGC GGTCTTGCCA GTCCTGCCGA CCACGCCCTT CGTCATCCTG GGCGCTGTCT GTCTGGGACG GGGATCACCG CGCCTTGCGC AGCGGCTGGA GCGGCACCGT GTGTTCGGCC CCGCGATCGC CGATTGGCGC GCCCATGGCG CCATCGCGCC GCGCGGCAAG GCTGTCGCCC ATCTGATGAT GGGCGCGGCG CTGATCGTCA GCCTGCTCGC GGGTGTGCCG GGGCTGGTCC TCGCGCTCCA GGCAATCTGC TTACTTGCCG CAAGCTTCTA TATCCTCAGC CGCCCGAATG GGGGCCGAGA CCTTCGAGAG CCAGGCGCCT TCGCAGCCCC AGCCAGATCC CCGCGCCCCT GTGGCGCTCG CCAATCTGGA GACTCTCCAT GGACCACCCC TTCGCTCTGG CACTGA
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Protein sequence | MVGSVGAVLP VLPTTPFVIL GAVCLGRGSP RLAQRLERHR VFGPAIADWR AHGAIAPRGK AVAHLMMGAA LIVSLLAGVP GLVLALQAIC LLAASFYILS RPNGGRDLRE PGAFAAPARS PRPCGARQSG DSPWTTPSLW H
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