Gene Dshi_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0490 
Symbol 
ID5711406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp475571 
End bp475996 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content69% 
IMG OID641266394 
Productprotein of unknown function DUF454 
Protein accessionYP_001531839 
Protein GI159043045 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000104879 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.570188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGGT CGGTGGGCGC GGTCTTGCCA GTCCTGCCGA CCACGCCCTT CGTCATCCTG 
GGCGCTGTCT GTCTGGGACG GGGATCACCG CGCCTTGCGC AGCGGCTGGA GCGGCACCGT
GTGTTCGGCC CCGCGATCGC CGATTGGCGC GCCCATGGCG CCATCGCGCC GCGCGGCAAG
GCTGTCGCCC ATCTGATGAT GGGCGCGGCG CTGATCGTCA GCCTGCTCGC GGGTGTGCCG
GGGCTGGTCC TCGCGCTCCA GGCAATCTGC TTACTTGCCG CAAGCTTCTA TATCCTCAGC
CGCCCGAATG GGGGCCGAGA CCTTCGAGAG CCAGGCGCCT TCGCAGCCCC AGCCAGATCC
CCGCGCCCCT GTGGCGCTCG CCAATCTGGA GACTCTCCAT GGACCACCCC TTCGCTCTGG
CACTGA
 
Protein sequence
MVGSVGAVLP VLPTTPFVIL GAVCLGRGSP RLAQRLERHR VFGPAIADWR AHGAIAPRGK 
AVAHLMMGAA LIVSLLAGVP GLVLALQAIC LLAASFYILS RPNGGRDLRE PGAFAAPARS
PRPCGARQSG DSPWTTPSLW H