| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0390 |
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| Symbol | rbsB3 |
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| ID | 5711300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 371715 |
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| End bp | 372728 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266289 |
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| Product | D-ribose-binding periplasmic protein precursor |
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| Protein accession | YP_001531740 |
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| Protein GI | 159042946 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.596263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC TGATGCTGGG CACAGCCCTG GCCTGTGCCA CCATGTCCGG GGCAGCGCTC
GCCGACACCA CCTCGGCTTG CCTGATCACC AAGACCGACA CCAACCCGTT CTTCGTCAAG
ATGCGCGAGG GCGCGGTCGC GAAGGCCGAG GAACTCGGGG TCGAGCTGAA GACCTTCGCG
GGCAAGTTCG ATGGCGACCA CGAAACCCAG GTACAGGCGA TCGAGACCTG CATCCTCGAC
GGCGCGAAGG GCATCCTGAT CACCGCGTCC GATACCTCGT CTATCACCGG TGCCGTGCAG
CAGGCCCGCG ATGCCGGGCT GGTGGTGATC GCACTCGACA CCCCGCTGAC CCCTGCGGAT
GCGGCGGATG CCACCTTTGC CACCGACAAT TATGTCGCCG GGTTGCTGAT CGGCCAATGG
GCGCGCGCCC AGATGGGCGA TGCCGCCGCC GATGCCAAGA TCGCCATGCT CAACATCCAG
GTGTCGCAGC CCACCGTGGG CGTTCTGCGC AACCAGGGCT TCCTCGAGGG CTTCGGCATC
GACATCGGCG ATCCCAACCG CTGGGGCGAC GAGACCGATC CGCGGATCGT GGGCCAGGAC
GTCACCCAAG GCTCCGAAGA GGGCGGCCGC GCCGCGATGG AGAACATCCT CGCCGCCGAT
CCGATGGTCA ACGTGGTCTA TACCATCAAC GAGCCTGCCG CCGCCGGGGC CTACGAGGCG
CTCAAGGCGA TCGGACGCGA GAACGACGTG CTCATCGTAT CCGTCGATGG CGGTTGCCCG
GGCGTGCAGA ACGTGGCTGA CGGCGTGATC GGCGCCACCT CGCAGCAATA CCCGCTGCTG
ATGGCCTCGC TCGGGATCGA GGCGATCAAG ACCTGGGCCG AAACCGGCGA GAAGCCCGCA
CCCACCCCGG GCAAGGACTT CTTCGACACC GGCGTGGCCC TGGTGACCGA CACCCCCGCT
GACGGGGTCG AGAGCATCTC GGTCGAAGAG GGCCGGAACC TGTGCTGGGG CTGA
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| Protein sequence | MKNLMLGTAL ACATMSGAAL ADTTSACLIT KTDTNPFFVK MREGAVAKAE ELGVELKTFA
GKFDGDHETQ VQAIETCILD GAKGILITAS DTSSITGAVQ QARDAGLVVI ALDTPLTPAD
AADATFATDN YVAGLLIGQW ARAQMGDAAA DAKIAMLNIQ VSQPTVGVLR NQGFLEGFGI
DIGDPNRWGD ETDPRIVGQD VTQGSEEGGR AAMENILAAD PMVNVVYTIN EPAAAGAYEA
LKAIGRENDV LIVSVDGGCP GVQNVADGVI GATSQQYPLL MASLGIEAIK TWAETGEKPA
PTPGKDFFDT GVALVTDTPA DGVESISVEE GRNLCWG
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