Gene Dshi_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0352 
Symbol 
ID5711261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp335163 
End bp335696 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID641266250 
Productacetyltransferase 
Protein accessionYP_001531702 
Protein GI159042908 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA CCACCGTCCA TATCCCCACG CTCACGACAG AGCGTCTGAC CCTCCGCGCC 
CCGAGGCCCG AGGATGCCGT CGCCTATGGC GCGTTCCTTG AAAGCCCCCG GTCCGCAGGC
GTGGGCGGCC CTTACAAGGC CGCGGACGCG TTCGACCGGA TGTGTAACAC CGTGGGCCAC
TGGCATCTGC GCGGCTATGG CCGCTGGATC ATCGCCGACC GCGACACGGA TGCGGCCCTT
GGGATCTGCG GGCCCTACTA TCCGGTGGAC TGGCCCGCCC CCGAATTCGC CTGGACGGTC
TTCGGCGACG CCGAGGGGCG CGGGATCGCC TTCGAGGCGG TGACCGAGGC CCGCCGCTGG
GCCTATGACA CGCTCGGCTG GGACACCGCG ATCAGCCTGA TCATCGAGGG CAACACCCGG
TCGTTCGCGC TGGCCGAACG GCTCGGTTGT CGCCGCGATG GCACCTATGA CAGCCCGTAT
TACGGCGCGA TGCAGATCTG GCGTCACCCC TCCGCACAGG AGCTCGCCGC ATGA
 
Protein sequence
MTGTTVHIPT LTTERLTLRA PRPEDAVAYG AFLESPRSAG VGGPYKAADA FDRMCNTVGH 
WHLRGYGRWI IADRDTDAAL GICGPYYPVD WPAPEFAWTV FGDAEGRGIA FEAVTEARRW
AYDTLGWDTA ISLIIEGNTR SFALAERLGC RRDGTYDSPY YGAMQIWRHP SAQELAA