| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0341 |
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| Symbol | rplS |
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| ID | 5711250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 328889 |
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| End bp | 329263 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641266239 |
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| Product | 50S ribosomal protein L19 |
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| Protein accession | YP_001531691 |
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| Protein GI | 159042897 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0335] Ribosomal protein L19 |
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| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.164171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCTGA TCGCACAGCT CGAAGCCGAG CAGATTGCCG AACTCGGCAA GGACATTCCG
GACTTCAAGG CCGGCGACAC CATCCGCGTC GGCTACAAGG TGACCGAAGG GACCCGCAGC
CGGGTCCAGA ACTACGAAGG CGTCTGCATC GCGCGCAAGG GCGGCGATGG CATCGCGGCC
TCCTTCACGG TCCGCAAGAT CAGCTTCGGC GAAGGCGTGG AGCGGGTCTT CCCCCTGCAT
TCCACCAATA TCGACAGCAT CGAGGTGGTC CGTCGCGGCA AGGTGCGGCG CGCCAAGCTC
TATTATCTGC GTGCCCGTCG CGGCAAATCG GCCCGGATCG CCGAGCAGAC CAACTACAAG
CCGAAATCGA ACTGA
|
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| Protein sequence | MNLIAQLEAE QIAELGKDIP DFKAGDTIRV GYKVTEGTRS RVQNYEGVCI ARKGGDGIAA
SFTVRKISFG EGVERVFPLH STNIDSIEVV RRGKVRRAKL YYLRARRGKS ARIAEQTNYK
PKSN
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