Gene Dshi_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0325 
SymbolfabG3 
ID5711575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp312924 
End bp313655 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content67% 
IMG OID641266221 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001531675 
Protein GI159042881 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.992211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTC AACGTACTCT CGTCCTGACC GGCGCCAGTC GCGGCATCGG CCACGCCACC 
GTGAAGAAGT TCAGCGCGGA GGGGTGGCGG GTTCTGTCCT GCTCCCGCCA GCCCTTCGAT
GCGCGGTGCC CATGGCCCGG CGGAGAGGAC AATCATATCC AGGTCGATCT CGCGGACCCG
CACAACACGA TGGAGGCGAT CTCGGTCATT CGCGACAAGG TGGGCGGTTG TCTCGATGCG
CTGGTGAACA ATGCAGGGAT CTCGCCCAAG GGGGCCGGTG GCGCGCGGTT GAACACGCTG
GACACGGACC TGCGGACCTG GGGACAGGTG TTCCACGTCA ATTTCTTCGC CTCGGTGGTG
CTGGCGCGGG GGCTGAAGGA TGAGCTGGCC GCCGCGGGCG GGGCGGTGGT GAACGTCACC
TCCATCGCCG GTACCCGGGT GCACCCCTTC GCCGGGGCGG CCTATGCCAC GTCCAAGGCG
GCGCTCAAGG CGCTGACGCG GGAGATGGCC CATGATTTCG GCCCGCTCGG CGTGCGCGTG
AATGCCATCG CACCGGGGGA GGTCGAAACC TCGATCCTGT CGCCTGGGAC GGACAAGATC
GTCGAGAAGC TGCCCCTGCG GCGGCTCGGG CAGCCCTCCG AGGTGGCCGA GGCGATCTAT
TTCCTGTGCT CGGAGCGGAG CAGCTACATC TCCGGCACGG AGATCGAGGT CAATGGGGGC
CAGCACGTCT GA
 
Protein sequence
MSRQRTLVLT GASRGIGHAT VKKFSAEGWR VLSCSRQPFD ARCPWPGGED NHIQVDLADP 
HNTMEAISVI RDKVGGCLDA LVNNAGISPK GAGGARLNTL DTDLRTWGQV FHVNFFASVV
LARGLKDELA AAGGAVVNVT SIAGTRVHPF AGAAYATSKA ALKALTREMA HDFGPLGVRV
NAIAPGEVET SILSPGTDKI VEKLPLRRLG QPSEVAEAIY FLCSERSSYI SGTEIEVNGG
QHV