Gene Dshi_0273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0273 
SymbolfusA 
ID5711523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp275486 
End bp277603 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content63% 
IMG OID641266169 
Productelongation factor G 
Protein accessionYP_001531623 
Protein GI159042829 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG ACTATCCCCT CGACCGGTAC CGTAACTTCG GGATCATGGC GCATATCGAT 
GCGGGCAAGA CCACCTGCTC GGAGCGCATC CTGTACTACA CCGGCAAGTC CCACAACATC
GGCGAAGTCC ATGATGGCGC GGCCACCATG GACTGGATGG AGCAGGAGCA GGAACGCGGG
ATCACCATCA CCTCCGCTGC GACGACCACC TTCTGGGAGC GCACCGAGGA TGGCGAGACC
GCCGACACGC CCAAGCACCG TCTGAACATC ATCGACACAC CCGGCCACGT CGACTTCACC
ATCGAGGTCG AGCGTTCGCT CGCCGTGCTC GATGGCGCGG TCTGCGTTCT GGACGCCAAT
GCCGGTGTCG AGCCCCAGAC CGAGACCGTC TGGCGCCAGG CCGACCGGTA CAAGGTGCCG
CGCATCGTGT TCGTCAACAA GATGGACAAG ATCGGCGCGG ACTTCTTCAA CTGTGTCCAC
ATGATCGAGG ACCGGACCGG CGCCCGCGCC GTGCCCGTGG CCATTCCGAT CGGCTCCGAG
AACGAGCTCG AAGGGCTTGT CGATCTCGTG ACCATGCAGG AGTGGGTCTA CAAGGGCGAC
GATCTCGGCG CGAGCTGGGT CAAGGGCGAG ATCCGCGACA GCCTCAAGGA TGTCTGCGAG
GAGTGGCGCG GCAAGATGAT CGAAGCGGCC GTCGAAGAAG ACGACGACGC GATGATGGAG
TACCTGGAAG GCAACGAGCC TGACGTGCCG ACCCTGCGCG CGCTGCTGCG CAAGGGCACG
CTCGCGCTGC ATTTCGTGCC GGTCCTGGGC GGCTCCGCGT TCAAGAACAA GGGCGTTCAG
CCTCTGCTCA ATGCCGTGAT CGATTACCTG CCGAGCCCGC TCGACGTGGT TGACTACATG
GGCTTCGCGC CCGGCGACGA GAACGAAGAG CGCAACATCC CCCGCCGGGC GGATGACGAC
ATGCCGTTCT CCGGCCTCGC GTTCAAGATC ATGAACGACC CCTTCGTGGG CTCCCTGACC
TTCACCCGGA TCTACTCCGG GACCATGAAC AAGGGCGACA CCGTTCTCAA CTCCACCAAG
GGCAAGAAAG AGCGCATCGG TCGGATGATG ATGATGCACT CTAACAACCG CGAAGAGATC
GAGGAAGCCT TTGCCGGCGA CATCATCGCG CTCGCGGGCC TGAAGGACAC CACGACCGGC
GACACGCTGT GCGACGTCAA GGAACCGGTG GTGCTGGAAA CCATGACCTT CCCGGACCCG
GTGATCGAGA TCGCCGTGGA GCCGAAGACG AAGAACGACC AGGAGAAGAT GTCTCAGGGT
CTGGCACGTC TGGCGGCAGA GGACCCGTCC TTCCGCGTCG AGACTGACAT CGAGTCCGGT
CAGACCATCA TGAAGGGCAT GGGCGAATTG CACCTCGACA TCCTGGTGGA TCGTCTCAAG
CGCGAGTTCA AGGTCGAGGC CAATATCGGC GCGCCCCAGG TGGCTTACCG CGAGACCATC
GGTCACGAGG TCGAGCACAC CTATACCCAC AAGAAGCAAT CCGGTGGGTC GGGTCAGTTC
GCCGAGGTCA AGCTGGTCAT CTCCCCGACG GAGCCGGGCG AAGGCTATTC CTTCGAGTCC
AAGATCGTCG GCGGTGCCGT GCCCAAGGAA TACATCCCGG GCGTGGAAAA AGGCATCAAG
TCCGTGATGG ACAGCGGCCC GCTCGCCGGC TTCCCGGTCA TCGACTTCAA GGTCGCCCTG
GTCGACGGCA AGTTCCACGA CGTGGATAGC TCGGTCCTGG CCTTCGAAAT CGCGGCCCGC
ATGGGCATGC GCGAAGGCAT GAAGAAGGCC GGTGCCAAGC TGCTGGAGCC CGTGATGAAG
GTCGAGGTGG TGACACCCGA AGAGTATACC GGTGGCATCA TCGGCGACCT GACCTCCCGT
CGCGGCCAGG TCACGGGGCA GGAACCGCGC GGCAACGCCG TGGCGATCAA CGCCTTCGTG
CCGCTGGCCA ACATGTTCGG CTACATCAAT ACCCTGCGTT CCATGTCCTC GGGCCGCGCG
CAGTTCACGA TGCAGTTCGA CCATTACGAT CCGGTTCCGG CCAATATCAG CCAGGAAATC
CAGGAAAAAT TCGCATAA
 
Protein sequence
MARDYPLDRY RNFGIMAHID AGKTTCSERI LYYTGKSHNI GEVHDGAATM DWMEQEQERG 
ITITSAATTT FWERTEDGET ADTPKHRLNI IDTPGHVDFT IEVERSLAVL DGAVCVLDAN
AGVEPQTETV WRQADRYKVP RIVFVNKMDK IGADFFNCVH MIEDRTGARA VPVAIPIGSE
NELEGLVDLV TMQEWVYKGD DLGASWVKGE IRDSLKDVCE EWRGKMIEAA VEEDDDAMME
YLEGNEPDVP TLRALLRKGT LALHFVPVLG GSAFKNKGVQ PLLNAVIDYL PSPLDVVDYM
GFAPGDENEE RNIPRRADDD MPFSGLAFKI MNDPFVGSLT FTRIYSGTMN KGDTVLNSTK
GKKERIGRMM MMHSNNREEI EEAFAGDIIA LAGLKDTTTG DTLCDVKEPV VLETMTFPDP
VIEIAVEPKT KNDQEKMSQG LARLAAEDPS FRVETDIESG QTIMKGMGEL HLDILVDRLK
REFKVEANIG APQVAYRETI GHEVEHTYTH KKQSGGSGQF AEVKLVISPT EPGEGYSFES
KIVGGAVPKE YIPGVEKGIK SVMDSGPLAG FPVIDFKVAL VDGKFHDVDS SVLAFEIAAR
MGMREGMKKA GAKLLEPVMK VEVVTPEEYT GGIIGDLTSR RGQVTGQEPR GNAVAINAFV
PLANMFGYIN TLRSMSSGRA QFTMQFDHYD PVPANISQEI QEKFA