| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0260 |
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| Symbol | rplK |
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| ID | 5712186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 257310 |
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| End bp | 257735 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266156 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_001531610 |
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| Protein GI | 159042816 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAAGA AACTCGCAGG CACGATGAAG CTGCAAGTGC CCGCCGGACA AGCGAACCCG
TCCCCCCCCG TGGGCCCGGC ACTGGGTCAG CGCGGCATCA ACATCATGGA ATTCTGCAAG
GCGTTCAACG CCAAGACGCA GGACATGGAG CCCGGCGCGC CGTGCCCGAC CGTGATCACC
TATTACCAGG ACAAGTCCTT CACGATGGAA ATCAAGACGC CGCCGGCGGC TTATTACCTC
AAGAAGGCCG CGAAGGTGAA ATCCGGGGCC AGCACCCCGT CGCGCCAGAC CGTCGGCACG
GTGACCGTCG CGCAGGTGCG CGAGATCGCC GAAGCGAAGA TGAGAGATCT GAACGCCAAC
GACATCGAAG GCGCGATGAA GATCGTTCTG GGCTCTGCCC GCTCCATGGG CATCGAGGTG
AAGTAA
|
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| Protein sequence | MAKKLAGTMK LQVPAGQANP SPPVGPALGQ RGINIMEFCK AFNAKTQDME PGAPCPTVIT
YYQDKSFTME IKTPPAAYYL KKAAKVKSGA STPSRQTVGT VTVAQVREIA EAKMRDLNAN
DIEGAMKIVL GSARSMGIEV K
|
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