| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0195 |
|---|
| Symbol | |
|---|
| ID | 5712120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 195599 |
|---|
| End bp | 196255 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641266090 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001531545 |
|---|
| Protein GI | 159042751 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3216] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTTTTCA AACGCCGCGA TAAACGTCCC TTCTGGAAGG TCGTGGCGGA ATCCCTCTGG
CCGAGGGGCG GTTGGGGCCG GGCGTTCCAT TACATCAAGC GGCGCTTGCA GCGGTTGCCC
GACACGCCCG AGACCATCGC GCGGGGTATC GCGGCGGGCG TGTTCACAAC CTTCACGCCG
CTTTACGGGG TGCATTTCGT CATCGCGGCG ATCCTGGCCA AGATCCTGCG CGGCAATATC
CTGGCGTCCC TTTTGGCGAC ATTCTTCGGC AACCCGCTGA CCTATATTCC GATCGGGATC
GTGTCGCTCA AGACCGGGCA TTTCATCCTC GGGACCGAGT TCGACCCCGA GGACAAGACC
TCGTTTCTGC GCAAGTTCAC AGAGGCCGGC GCCGATCTGT GGAACAACGT CGTCGCGATC
TTCACCGACC GGGAGCCGCA ATGGGATCAC CTGGCGCGGT TTTTCGACGA GGTGTTCTGG
CCCTACCTTG TGGGCGGAAT CATCCCGGGG ATCATTGCGG GCGCGGTGAT GTACCATCTC
AGCCTGCCGG TGCTGCGCGC CTACCAGAAG CGCCGCAAGG GTCGGTTGAA GAAAAAGATC
GAGGCGTTGC GCGTCAAGGC GAAGTCGCGG GCTGACGAGG CCCATCGCGC GCCCTAG
|
|---|
| Protein sequence | MVFKRRDKRP FWKVVAESLW PRGGWGRAFH YIKRRLQRLP DTPETIARGI AAGVFTTFTP
LYGVHFVIAA ILAKILRGNI LASLLATFFG NPLTYIPIGI VSLKTGHFIL GTEFDPEDKT
SFLRKFTEAG ADLWNNVVAI FTDREPQWDH LARFFDEVFW PYLVGGIIPG IIAGAVMYHL
SLPVLRAYQK RRKGRLKKKI EALRVKAKSR ADEAHRAP
|
|---|
| |