Gene Dshi_0175 details

Gene Information

• Locus tag: Dshi_0175
• Symbol: cbiG
• ID: 5712100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dinoroseobacter shibae DFL 12
• Kingdom: Bacteria
• Replicon accession: NC_009952
• Strand: +
• Start bp: 178678
• End bp: 180483
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 641266070
• Product: precorrin-3B C17-methyltransferase
• Protein accession: YP_001531525
• Protein GI: 159042731
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1010] Precorrin-3B methylase; [COG2073] Cobalamin biosynthesis protein CbiG
• TIGRFAM ID: [TIGR01466] precorrin-3B C17-methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.120567
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTGTAA CCCTTGTGGT CGTGGCGATT TCGCGTGCGG GCGAGGACAC GGCGCACCGG 
ATCGCCGCCG CGCGCGGCTG GGCCGTGCAT GGCCGGGCGG GCCGCGTCGA CCGGGCGGAT 
GCCCATTTCG ACAATGCGCT GACCCATGTG CGCGACCTCT TTGCCGCCGG GGTGCCGGTG 
GTGGGGGTCT GCGCGGCCGG CATCCTGATC CGGGCGGTGG CCCCCCTGCT GGCCGACAAG 
ACCGCCGAGC CCCCCGTTGT GGCCGTGGCC GAGGACGGGT CCGTGGTGGT GCCGCTTCTG 
GGCGGGCACC GGGGCGCGAA CCGGATCGCG GCGGATCTGT CGGACCTTCT GGGCGGGGTG 
TCGGCGGTGA CGACGGCGGG GGATGTGGCG CTCGGCGTGG CGCTGGATGC ACCGCCGTCG 
GGCTACCGGC TGGCCAACCC GGGCGATGCG AAATCGGTGA TGGCGGGGCT CTTGTCGGGG 
GGCGGCGCGC GTCTGACCGG AGAGGCGCTG TTCGACCTGC CCGCTGGCGA GGGGGCCGAG 
ATCGCCGTGA CCGAGGCGCC GCTGGCCGGT GGGCCGGACC GGCTGGTCTA TCACCCGCAA 
CGCTTTGCGC TCGGCGCCGG TTGCGCGCGG GATGCAGACC CGCAGGTGCT GCGGGCGCAG 
GTCTTCGAGA TGCTGGCGGA GGCCGGGGTC GCTCCCGGTG CCGTGGCCTC GCTCAATACC 
CTGGGCCTGA AGGCCGACGA GCCTGCGATG CATGCGCTGG CCGCCGAACT GGGCGTTCCC 
TTGCGGGTCT TCACCGCGGC CGAACTGGAG GCGGAGGCCG CGCGGCTCGC CACCCCGTCC 
GAGGTGGTCT TTGCCGAGGT CGGTTGCCAC GGGGTCGCGG AAGGCGCGGC GCTGGCGGCT 
GCGGGGCCGG ACGCGGTGCT GGTCCAGCCC AAGCGCAAGA CCGCGACGAC CACCTGCGCG 
CTGGCCCGCG CCCCCGCGCC GATCACCGCG CTGCGCGGCC GGGCACGGGG ACGGGTGTCG 
GTCGTGGGCA TCGGGCCCGG CCAGTCGGCC TGGCGCACAC CCGAGGCTAG CCGCCTGGTG 
GCGGAGGCGG AGGAGTTGGT GGGCTACGGC CTCTATATCG ACCTGCTCGG CCCGCTGGCC 
GCGGGCAAGG CGCGCGCGGA TTTCCCCCTG GGCGGGGAAG AGGACCGCTG CCGCTACGCG 
CTGGAACGGG CGGGGGAGGG GCGCAACGTG GCCCTCGTGT GTTCGGGCGA TGCGGGGATC 
TATGCCATGG GCGCGCTGGT GTTCGAGCTC TTGGACCGGG GGCCGGAGGC GCAGGGCGTG 
TCGGATGCCG CGCGCCGGGT GGAGGTGATT TGCGCGCCCG GTGTGAGCGC GCTGCAGGCC 
GCGGCGGCGC GGGCGGGCGC ACCGCTGGGC CATGATTTTT GCGCGATTTC CCTGTCGGAC 
CTGCTGACGC CGCGGGCGGA TATCCTGCGG CGGCTGCGGG CGGCGGCGGA GGGGGATTTC 
GTCATCGCCT TCTACAACCC GGTCTCGAAG ACCCGCCGGA CCCTCTTGGC CGAGGCGCGC 
GAGATCCTGC TGGCCCACCG GCCCGCGGAC ACGCCCGTCC TGCTGGCGAG TTCTCTGGGA 
CGCCCGGAGG AGGAAATCCG CTATCGCCGG CTCGACGGTC TGGAGGTGGA CGAGGTCGAC 
ATGCTCACCG TGGTGCTGGT GGGCTCGTCG AATTCGAAGC TCGCGCAACT GGGCGCGGGG 
CCGCGCATGT ACACGCCGCG CGGCTATGCG CGCAAGATCG ACGGGGACCT GTCCGATGCG 
GGGTGA 

 

Protein sequence

MAVTLVVVAI SRAGEDTAHR IAAARGWAVH GRAGRVDRAD AHFDNALTHV RDLFAAGVPV 
VGVCAAGILI RAVAPLLADK TAEPPVVAVA EDGSVVVPLL GGHRGANRIA ADLSDLLGGV 
SAVTTAGDVA LGVALDAPPS GYRLANPGDA KSVMAGLLSG GGARLTGEAL FDLPAGEGAE 
IAVTEAPLAG GPDRLVYHPQ RFALGAGCAR DADPQVLRAQ VFEMLAEAGV APGAVASLNT 
LGLKADEPAM HALAAELGVP LRVFTAAELE AEAARLATPS EVVFAEVGCH GVAEGAALAA 
AGPDAVLVQP KRKTATTTCA LARAPAPITA LRGRARGRVS VVGIGPGQSA WRTPEASRLV 
AEAEELVGYG LYIDLLGPLA AGKARADFPL GGEEDRCRYA LERAGEGRNV ALVCSGDAGI 
YAMGALVFEL LDRGPEAQGV SDAARRVEVI CAPGVSALQA AAARAGAPLG HDFCAISLSD 
LLTPRADILR RLRAAAEGDF VIAFYNPVSK TRRTLLAEAR EILLAHRPAD TPVLLASSLG 
RPEEEIRYRR LDGLEVDEVD MLTVVLVGSS NSKLAQLGAG PRMYTPRGYA RKIDGDLSDA 
G