Gene Dshi_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0153 
Symboldao 
ID5711621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp153035 
End bp154093 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content73% 
IMG OID641266048 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001531503 
Protein GI159042709 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAATTC CGGATGTGAC CGTGCTGGGC GCGGGGATCC TTGGGCTCTC GGCCGCCTAT 
GCCTGCGCGC GCCGGGGCGC ACGGGTCCGG GTGATCGAGA CGCATCACGT GGGCGCGGGG
TCCTCCGGTG GCGTCGTCGG CGCGCTGGCC CCGCATACGC CGGAAAAGTG GAATCCCAAG
AAACAGGTGC AGTTCGACAG CCTGATCCGG GCGGAAGCCT GGTGGACCGA GATCGCGGGG
GCCACCGGGT GCGACCCGGG GTACGCCCGG CTGGGCCGTC TGCAACCCAT TGCCGACGAC
CGGGCGCTGG CGCTGGCCCG GGACCGGGCG CAGCAGGCCG AAACCCTGTG GCAGGGCCGC
GCCGCCTGGC ACATCCGGCC TGCGACGGAG TTTGCCAACT GGGCGCCCGT GACCTCCACG
GGCCTGGTGA CCCACGACAC CCTGACCGCG CGCCTGCACC CCGCCAAGGC CTGCGCCGCC
ATGGCCGCGG CGCTGCAGGG GCTGGGCGCA GAGATCCTGA TCGGCGACCA TGCACCGACC
GGCAAGGTGA TCGAGGCGAC GGGCGCGGCG GGGTTGGCCG AACTCAGCGG ACATTTCGGG
GTGCAGGTGG GCAACGGCGT GAAGGGCCAG GCGGCCGTGC TCGGATACGA CGCCCGTACC
TTGCCGCAGC TGTTCGTCGA CGGGTTGCAC ATCGTGCCCC ATACGGACGG GACCACGGCG
GTCGGCTCCA CCTCCGAGCG GGACTATACC GACCCGACCG GCACCGATGC CCTGCTCGAC
GCTGTGATCG CCCGGGCCCG TGCGGCGGTG CCGGTCCTGC GCGATGCCCC GGTGCGCGCC
CGCTGGGCTG GGCTGCGCCC GCGCGCGAAG TCCCACGCGC CGATGCTGGG GGCCCATCCT
CTGCGCCCGG ACCGGGTGAT CCTCAATGGG GGGTTCAAGA TCGGCTTCGG CATGGCCCCG
GAACTGGCGG AAATGGCCGC CGACCTCATC CTCGACGGAC GGGCCCGCAT TCCGCCGGAG
TTCGATCCCG CCGCCAGCCT GCCGAAGCCG ACGCCCTGA
 
Protein sequence
MAIPDVTVLG AGILGLSAAY ACARRGARVR VIETHHVGAG SSGGVVGALA PHTPEKWNPK 
KQVQFDSLIR AEAWWTEIAG ATGCDPGYAR LGRLQPIADD RALALARDRA QQAETLWQGR
AAWHIRPATE FANWAPVTST GLVTHDTLTA RLHPAKACAA MAAALQGLGA EILIGDHAPT
GKVIEATGAA GLAELSGHFG VQVGNGVKGQ AAVLGYDART LPQLFVDGLH IVPHTDGTTA
VGSTSERDYT DPTGTDALLD AVIARARAAV PVLRDAPVRA RWAGLRPRAK SHAPMLGAHP
LRPDRVILNG GFKIGFGMAP ELAEMAADLI LDGRARIPPE FDPAASLPKP TP