| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0127 |
|---|
| Symbol | |
|---|
| ID | 5711750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 125398 |
|---|
| End bp | 126168 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641266022 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001531477 |
|---|
| Protein GI | 159042683 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.544262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTGC GCCGGTTGAA CGCGTGGATG TCAGGCGGCG GCGAGCGGGC CGCCCCTCCG
GAATGGCAGG ACGTGATGGC GCCGCCCGCC GGGTGCGACC GCAGTGTCGA GGTGCAGCAG
CGCGATGCCG CCCGCCGCGC CCGCGCCCGG GCCGATGCGG AGGCCCGCGA GGCCGAGGCC
CGGTTGCGGC AGACCCAGCG CCCACGGCCC GACTTGCCCA CGGGGGCTGT CTGGGCCCAG
CGCCCGACGG CCTGGCACCA AGCGACGGAA GATCCGATCC GCATCGGCCC GGCCAACGGC
ACCCGGATCA CACCGGACCT GACGCTGTTT CACGACTGCC CGAAGGCCGA AATGATCCTG
CGCCAGTCCC TCGCACCGGC CAGCGCCCCC GCGCCCTTCG CGCTGATCCT CGACACCCTG
CATTTCGAAG GCAGCTTCCT GTCCCTGGTG ACCGGCCTGC CGGACAGCGA AGCCGCCGCG
CTCAGCGACC GCGACGTTCT GCGGATCGAG TTGAGGCTGG AGGCTTCGGC GCCGACGAAG
CTTTATGGTC GTCTGAACAT GGAGCAGGGG CCGAACACCG CCCAGATGCT GTCGGAATTC
TCTGCGCCCG AAAGTGGAAC ATGTCATGCC GCCTTCGATC TGGCCTATGG CGATTTGCGC
GCGCAGCCGG TAGATCATGC GTGGATCGAC CTGATCGTGG AGCGCCCGGC CATGTTGCGG
CTGACCTTGC ATGACGTCCT GCTGTCCCGA TATCCGCGGG CGGAAATGTG A
|
|---|
| Protein sequence | MMLRRLNAWM SGGGERAAPP EWQDVMAPPA GCDRSVEVQQ RDAARRARAR ADAEAREAEA
RLRQTQRPRP DLPTGAVWAQ RPTAWHQATE DPIRIGPANG TRITPDLTLF HDCPKAEMIL
RQSLAPASAP APFALILDTL HFEGSFLSLV TGLPDSEAAA LSDRDVLRIE LRLEASAPTK
LYGRLNMEQG PNTAQMLSEF SAPESGTCHA AFDLAYGDLR AQPVDHAWID LIVERPAMLR
LTLHDVLLSR YPRAEM
|
|---|
| |