Gene Dret_2487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2487 
Symbol 
ID8420349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2851486 
End bp2853018 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content59% 
IMG OID645039090 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_003199347 
Protein GI258406605 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAGA TTCCCCCTCC CCAGACCGAA ATACGCTCTG CAACCACGGC CCATATGTCC 
TGCCGACCGG ATCCGCTCCA GGAACCTGTG GCCATCGTCA TTTTCGGTGC CACCGGGGAC
CTGACCTCCC GCAAACTTTT TCCTGCTCTG TTTTCCCTTT TTGCCGGAGA GGTCCTGCCC
CAACGGCTGG CCATTATCGG TGTTGGCCGC TCGTCCTGGT CAGACGCTGC ATTTCGCGAG
CATATGCACA ACCAGGTCGC CGGAAACGCA TCCTATTCCG CTGCTGCCTG GGAGACATTG
GCCCCGCGTC TGCGGTACAT CCAACAGGAG TATACCGGCG ACTATGCCCC ATTGGCACAG
CGCCTCGAAG AAATCGATGC CGAGCTCGGA CTCGAGGGCA ACCGGCTGTT CTATCTCGCT
GTGCCCCCCA CGGTGTACAT CCCTATAGCC GACGGCCTCG GGGCAAGCGG TTTGGCGGCT
GAAGACCACG GATGGAGCCG GTTTGTGGTT GAAAAACCCT TTGGCCGGGA CCTGGCTTCG
GCCGAGTCGC TTGATGCGAG TCTGCACACC CATTTTGCGG AGCACCAGAT TTTCCGTATC
GACCACTATC TGGCCAAGGA AACGGTGCAG AACATCCTCA TGCTCCGGTT TGCGAACACG
ATTTTCGAAC CGGTCTGGAA CCGCCGCTAT GTCGATTCGG TTCAGATCCT GGCCGCCGAG
TCCATCGGTG TGGGCCACCG GGCTGGCTAT TATGATAGTT TCGGCGTCTT ACGGGACATG
TTTCAAAACC ATATGATGCA GCTTTTGTCC CTGTGCGCCA TGGAACCGCC ATCGCATTTC
GAGGCCGACC GGGTGCGCGA CGAAAAGACC AAGATATACC GGAGCCTTCG TCCGTTTCAT
CCGCAGCGTG TCCAGTCGGA TCTTGTTCTC GGGCAATATG CGGCCGGCGA AATCGACGGA
GCAGCGGTAC CTGCCTATCG TACGGAACGC GGCGTCGCCA AGGACTCCCA GACCCCCACT
TTTGCCGCAA TGCGGCTGTA TATCGACAAC TGGCGCTGGC AGGGAGTGCC GTTTTATCTT
GTCTCGGGCA AACGGCTGGC AGCCAAGCGC ACCGAGATCC GGATCCAGTT CAAACATGTG
CCGTACTCGT TGTTTCGAGG TGTCTTGAGC GAGGATATTG CTGCGAACAG TCTGGTCCTT
GGCATCCAGC CCCGGGAGGA GGTCAGTCTC GAGTTTCAGA CCAAAAGCCC CGGGGCCAAG
ATGTGTCTGC GACCGGTCCA GATGCATTTC GACTACCACC ACGGCACGGC CGGCCCAGTC
CTCGAGGCCT ATGAAAAGGT CTTGCTGGAT TGCCTGCTCG GGGATCAGAC CTTGTTCTGG
CGTCAGGACG GGGTGGAACT CTGCTGGGGA TTCCTGGACC CGATTCTGCA AGGGTGTGAA
AACGATCCCG GCAAGCAGCC CCACCTCTAT ACCGCAGGAT CCTGGGGTCC TGAGGCAGCC
GAGGGGTTTT TGCCCCCTTG GGAAAAAAGG TGA
 
Protein sequence
MPEIPPPQTE IRSATTAHMS CRPDPLQEPV AIVIFGATGD LTSRKLFPAL FSLFAGEVLP 
QRLAIIGVGR SSWSDAAFRE HMHNQVAGNA SYSAAAWETL APRLRYIQQE YTGDYAPLAQ
RLEEIDAELG LEGNRLFYLA VPPTVYIPIA DGLGASGLAA EDHGWSRFVV EKPFGRDLAS
AESLDASLHT HFAEHQIFRI DHYLAKETVQ NILMLRFANT IFEPVWNRRY VDSVQILAAE
SIGVGHRAGY YDSFGVLRDM FQNHMMQLLS LCAMEPPSHF EADRVRDEKT KIYRSLRPFH
PQRVQSDLVL GQYAAGEIDG AAVPAYRTER GVAKDSQTPT FAAMRLYIDN WRWQGVPFYL
VSGKRLAAKR TEIRIQFKHV PYSLFRGVLS EDIAANSLVL GIQPREEVSL EFQTKSPGAK
MCLRPVQMHF DYHHGTAGPV LEAYEKVLLD CLLGDQTLFW RQDGVELCWG FLDPILQGCE
NDPGKQPHLY TAGSWGPEAA EGFLPPWEKR