| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2478 |
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| Symbol | |
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| ID | 8420340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2841524 |
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| End bp | 2843452 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645039081 |
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| Product | putative CBS domain and cyclic nucleotide- regulated nucleotidyltransferase |
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| Protein accession | YP_003199338 |
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| Protein GI | 258406596 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00776763 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACGAC ACCACCGCCA CAATTCCCTG GAAGCCCAGT CCATAGTCGA CTTTTTGAGC
CAGACCCTGC CCTTTGCCGA TCTGCCGCGC GACACGGTGG CTGATTTGGC CCGGCAGTGT
GAAATCGATT TCGCCCCGAA CAAGACCTTG CTCTTTCGGG AAAATGTAAC CGTTATCAAC
GCCCTGCTTA TCATCCAAAA AGGCGGAGTC CGGCTCTTTA TGCGCGATCA GAGCGGCATC
CCCATCCTGA CCGATTACAG AGGGGAGGGG GACACCCTCG GCGGCCTGGG GCTGCTGCGC
GGCAGTAAAG CGACCATGAA TGCGGAGACC GTTGAAGATA CCTTTTTCCT CCGCCTGCCA
GCGAAATACT TCCACCAGGT CCTCAACGCC TATCCGGCCG TGGCCAAGCA TTTTCTGGAC
AAATTTTCCG GGGACTTTTT GAACCGGGCC CTGGACAGTC TGCGCCAAAG CACGCTGCAT
TCCGAAACCA CCGCCCCCCT GCCCCTGTTC ACCACCCGCG TCGAGGAATT GATCGCTCGG
CCACTGGTCA GCATGCCGAG TCACATGCCC TTGTGGCAGG CCGCGGAAAA AATGAGCCGG
GAAGGGGTCG GTGCTCTTTT GGTGTACTCA GAGGAAGGGA TCCCAGCAGG GATCGTGACT
GACAAAGATT TCAGGGACAA GGTGGTGGCC CAGAAACGGG ACGGCAACGA GCCCCTCAGC
GCGATCATGA GTGCGCCGGT TGAGACGGTC TCGGGGCAGA CAACGAGCAT CAACGCCTTA
CTCCAGATGA TGGAAAAACA TTTCCACCAT CTGGTGGTCG AAGACAGTGC CCATACCCCT
TGCGGCATGA TTTCTTCGCA CGATTTCATG CTCCTGCAGG GCCAATCCCC GTTTTCCCTG
TTCAAGGAAC TCCAACGAGC AACCCATCTC CATCAACTCC ACGGGTTCGC GGCCAAACAG
ACCCGGCTTA TGGCCAGCCT GTTCGGTCAC GGCGCCACCA CCACCCACTT GGGACACCTC
AATGCAGCCT TATACGACCT TTTGACCGAA CGGCTGGTGA CCCTTTTGCA GGAGCATTTC
GGACCGCCTC CGGCTCCCTT GTGCTGGATG TGCATGGGCA GTGAGGGACG ACGGGAACAG
GTTCTGCCGA CAGATCAGGA CAATTGCCTG GTCACGGCCG AATTGCCTCC GGAGCAACGC
CAGGCCGGCA GAACATATTT TCGCCACTTC GGCGAAGCCA TGGTCGAAGA GTTGATCGCC
TGTGGCTTCC CGCCCTGCCC GGGCGAAATG ACCGCGGCGA GCCCTCATTG GAACCAGAGC
ATCACCAAAT GGGAGACCAC CTTTTCCCAT TGGCTCCGGG AACCGGATTC CAAAGAGATC
ATGTTGGCCA CGATATTCTT CGATATCCGG TCGGTCACTG GACACCCGGG GCTTGGGGAA
CACCTGCGCG ATCTGATCCA GAACAAAGTT CCCCGGGAGG ATATCTTCCT GCGCCACATG
GCTATGGACT GCTTGACCTC CCGCCCTCCC CTGACCCTGT TCAAACAATT CGTCATGGAA
AAGGACGGGG CTTCTAAAAA CCGCCTGGAC CTCAAAGGAC GCGGCCTGAT GCCGTTGATC
GACGGGGTTC GTATCCTGGC CCTGGCCGCA GGCATCCGGG CCACGGGAAC CTTGGAACGG
CTTGAAGCCC TCCGTCTCCA GGCTGAAATT TCGGATGAAT TGTGCTCGGA ACTCAGTGAG
GCCTTTGAAT TTATCAGCCA TCTGCGCACA GCGCACCAAT TACACCAATG GAAAAACGAC
CAGGCCCCGG ACAATCTGCT TGCCCCGGAA ACCTTGACCT CCTTGGAAAA ACGGACCCTG
AAGGAAGCAT TTGCCGTCAT CAGGCGCGAG CAGCAGTTCA TCCGCGACCG CTTTCGGCTC
CATATCTAG
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| Protein sequence | MPRHHRHNSL EAQSIVDFLS QTLPFADLPR DTVADLARQC EIDFAPNKTL LFRENVTVIN
ALLIIQKGGV RLFMRDQSGI PILTDYRGEG DTLGGLGLLR GSKATMNAET VEDTFFLRLP
AKYFHQVLNA YPAVAKHFLD KFSGDFLNRA LDSLRQSTLH SETTAPLPLF TTRVEELIAR
PLVSMPSHMP LWQAAEKMSR EGVGALLVYS EEGIPAGIVT DKDFRDKVVA QKRDGNEPLS
AIMSAPVETV SGQTTSINAL LQMMEKHFHH LVVEDSAHTP CGMISSHDFM LLQGQSPFSL
FKELQRATHL HQLHGFAAKQ TRLMASLFGH GATTTHLGHL NAALYDLLTE RLVTLLQEHF
GPPPAPLCWM CMGSEGRREQ VLPTDQDNCL VTAELPPEQR QAGRTYFRHF GEAMVEELIA
CGFPPCPGEM TAASPHWNQS ITKWETTFSH WLREPDSKEI MLATIFFDIR SVTGHPGLGE
HLRDLIQNKV PREDIFLRHM AMDCLTSRPP LTLFKQFVME KDGASKNRLD LKGRGLMPLI
DGVRILALAA GIRATGTLER LEALRLQAEI SDELCSELSE AFEFISHLRT AHQLHQWKND
QAPDNLLAPE TLTSLEKRTL KEAFAVIRRE QQFIRDRFRL HI
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