| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2415 |
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| Symbol | |
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| ID | 8420275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2766065 |
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| End bp | 2767396 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645039016 |
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| Product | nucleotide sugar dehydrogenase |
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| Protein accession | YP_003199275 |
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| Protein GI | 258406533 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000438883 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATCAC AGCTGCACCA GCTGCCAGAG TTGCGCTTGC TTCAGGACAA GAAGCAGGCT
GTGGCCGTTG TGGGCCTCGG GTATGTGGGG CTCCCTCTGG CTGTGGCCCT GGCCCGCCAT
TTTCGGGTTA TCGGATTTGA TATCGCCCGG GAGCGGGTGG ATGAACTTCA GGCTGGCCGG
GATTCAACGG GTGAGATTGA TCCCGCAGTG CTGGGAGAAG TGGACCTCGA ATTGACCTGT
GATCCAGAAA TATTGGCTCA GGCCACGGTG TTTATCGTTG CCGTGCCCAC CCCCATCGAT
GCCAACCGGC GCCCTGATCT CGGGCCGACC CGCGGTGCGA CGCGGACCGT GGCCGGCGCC
ATGGGCCCGG GCAGTGTGGT GGTCTTTGAA TCCACCGTCT ACCCGGGGGT GACCGAAGAG
GTCTGCGTGC CGCTTTTGGA AGAGGTCTCC GGTCTGCAAT GCGGGCGTGA TTTCCGGGTC
GGGTATTCCC CGGAGCGGAT CAATCCTGGG GACAAGGACA ACCGGCTGGA AAACATTATC
AAGGTTGTTG CCGGTCAGGA CCAGGCGACC ACCGACCTGC TGAGCGATCT CTACGGCAGT
GTCGTGCACG CCGGAATCCA CAAGGCCCCG ACCATCAAGG TCGCGGAAGC AGCCAAGGTG
ATTGAAAATA CCCAGCGCGA TCTGAATATC GCCCTGATGA ACGAATTGGC CCAGATGTTC
CACAAAATGG ATATCGACAC CCAGGATGTC CTGGCCGCTG CGGGGACGAA ATGGAATTTT
CTGCCCTTTC GCCCCGGCCT TGTCGGGGGG CATTGCATAG GCGTCGATCC CTATTATCTG
ACGTTCAAGG CCGAGGCCCT TGGGCTGCAC CCGCAGATCA TCCTTGCCGG CCGGCGTATC
AACGACGGCA TGGGCGCTTA TGTGGCCCAG ACGGCGGTCA AATCCCTTGT GCAAAACGGC
TCGCCTGTCC ACGGTGCACG CGTGGCGGTT TTAGGGGTGG CCTTCAAGGA AAATGTGCCC
GATCTGCGCA ATACCCGGGT GGTCGACATT GTCCACGAGT TGCAGGACTA TCAGATTGAA
GTGCTGGTGC ACGATCCCCT CGTTTCCGCT GACGAAGCTC GGGAGGAATA CGGCCTGGAA
CTCGTCGACT GGGATGCCTT GAGCGATCTC GACGGACTTA TCCTGGCTGT GGGGCATCGC
CCCTACACTG CATTGTCCCC TCAGCGCATT GCCGAGATGT TCGCCTCCGG ACAGGGATTG
GTCATGGATG TCAAAGCGGC CCTGGACGGG GAGATGCTCC GGGAGCAGGG CCTGACCTAT
TGGCGGCTGT AG
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| Protein sequence | MQSQLHQLPE LRLLQDKKQA VAVVGLGYVG LPLAVALARH FRVIGFDIAR ERVDELQAGR
DSTGEIDPAV LGEVDLELTC DPEILAQATV FIVAVPTPID ANRRPDLGPT RGATRTVAGA
MGPGSVVVFE STVYPGVTEE VCVPLLEEVS GLQCGRDFRV GYSPERINPG DKDNRLENII
KVVAGQDQAT TDLLSDLYGS VVHAGIHKAP TIKVAEAAKV IENTQRDLNI ALMNELAQMF
HKMDIDTQDV LAAAGTKWNF LPFRPGLVGG HCIGVDPYYL TFKAEALGLH PQIILAGRRI
NDGMGAYVAQ TAVKSLVQNG SPVHGARVAV LGVAFKENVP DLRNTRVVDI VHELQDYQIE
VLVHDPLVSA DEAREEYGLE LVDWDALSDL DGLILAVGHR PYTALSPQRI AEMFASGQGL
VMDVKAALDG EMLREQGLTY WRL
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