Gene Dret_2323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2323 
Symbol 
ID8420183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2639799 
End bp2640653 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content40% 
IMG OID645038926 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_003199185 
Protein GI258406443 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATAG GATTTATCGG TGTTGGTTTA ATGGGTGGCC CGCTAGCTAG AAATTTAATT 
CGTAACGGTT ATTCAGTTGA TGTGTTTGAC TTGAGTGCTG AAGCGATTGA AAAAACTGTA
TCAGTTGGTG AAAGCGGGAA AAAAGCTAAT TCTATTGATG AGCTTAAAAG TTCCGATGTT
ATTTTCACTA GTTTGCCTTT GCCTCAACAT GTAACAGATG TAATGTTGAA CGATGGCGGT
TTATATGAAA AGTTAAACGC CAATAGCACG CATGTAGAGT TATCAACTAT TGATGCGAGT
ACAGCTGAAA CGCTTGAAAA AGAAGCAAAT AAAAAAAATA TTAGCTACAT ACAATGCACA
CTTGGAAAGA CACCTGCTCA TGCTGAAAAA GCAGAAGAAC CGATGTTTAT TGGTGGCGAT
GAGAGAGCTT ATGAAAAGAT AAAAAATATA CTAAGCTCAA TTGGGATAGT GAATTATGTT
GGACCAGTTG CAGCCTCATG TGCTGTTAAG CTCATTTCGA ATATGATTGG AATGACCAAT
GTCGCAGTTT TAGCTGAAGG CATGAAAGTC GGTGATAAGG CCGGACTCGA TAGGAAAAAA
TTGTTGGAGC TTCTTGCCGA TACGGGGGCC CACAGTTTCC AGATGGATGT ACGTGGCCCC
TGGATAGCTG AAGAAGATTA TAAATCAAGA TTTCCTTTAG ACTTAGCCCT AAAGGATATT
CGAATTGGTC TGGAAATGAG TAAAGACTGG AATCTTGACC TTCAAACAAT GGAGTCTGCG
CTTAAAGAGT TTATGAGGGC ACATGATGAG GGTTATGGCC AGGAAGACTG TAATGCAGTT
TTCAAAGTTT TATAA
 
Protein sequence
MRIGFIGVGL MGGPLARNLI RNGYSVDVFD LSAEAIEKTV SVGESGKKAN SIDELKSSDV 
IFTSLPLPQH VTDVMLNDGG LYEKLNANST HVELSTIDAS TAETLEKEAN KKNISYIQCT
LGKTPAHAEK AEEPMFIGGD ERAYEKIKNI LSSIGIVNYV GPVAASCAVK LISNMIGMTN
VAVLAEGMKV GDKAGLDRKK LLELLADTGA HSFQMDVRGP WIAEEDYKSR FPLDLALKDI
RIGLEMSKDW NLDLQTMESA LKEFMRAHDE GYGQEDCNAV FKVL