| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2240 |
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| Symbol | pyrB |
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| ID | 8420098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2543858 |
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| End bp | 2544790 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038841 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_003199102 |
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| Protein GI | 258406360 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.862655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTGGC CGCACAAGGA TCTGCTCAGT ATCCAGCAGC TGACGTCTCA GGAAATCGAA
CACATCTTCG ATCTCGCTCT CAAATTCGCC GAAATCAACC AACGCCCGGT CAAAAAGGTC
CCGACCCTCA AAGGCAAAAG TGTTGTGCTC TTTTTCGCCG AACCCAGCAC ACGGACCAAA
ATCTCCTTTG ACATGGCCGG CAAGCGGCTT TCGGCCGACA CATTTTCGCT GGCCCAGTCC
GGCAGCAGCT TGCAAAAAGG CGAGAGCCTG AGCGATACCG CCCTCACCCT TCAGGCCATG
CATCCGGACG CCATTGTCTT GCGCCATGGG GCCAGCGGGG CCTCGGCCTA TCTCGCCCGC
CAGCTCGACT GCGCGGTTAT CAATGCCGGT GACGGCTGGC ACGCCCACCC GACGCAGGCC
CTGCTCGACG GCTTCAGCCT GTTTCAGGTC TGGGAATCCT TTGCGGGCAA GAATGTGCTG
CTGCTCGGCG ACATCGCCCA CAGCCGGGTC GCGCGCTCGG ATATCGAACT CTTGACCAAG
CTCGGCGCCA AGGTACGGGT CTGCGCCCCG CGGACCCTGC TTCCGCCGGC CCTGAAGTCA
TGGCCGGTGG AGATCGAGCA GGATTTGGGT CGGGCCTGTC AGGACATGGA CGCGGTCATC
TGCCTGCGCT TGCAACTCGA ACGCCAGCAG GCCGGGCTTT TGCCTGATCT GCGGGAATAC
GCCCGCCACT TCGGCCTGGG GCCGGCCCAT CTGAGCCACG CCCGGACAGG GGCCCGAATC
CTGCACCCGG GGCCCATCAA TCGCGGGATC GAAATCGCTG CGGAACTGGC CGATGCCCCG
AACTCGCTGA TCCTGGACCA AGTCTCCAGC GGCGTGGCCA CACGTATGGC GCTGCTCTAT
CTCTATCTGA CGTCCACTCG GGAGGAAGCC TGA
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| Protein sequence | MHWPHKDLLS IQQLTSQEIE HIFDLALKFA EINQRPVKKV PTLKGKSVVL FFAEPSTRTK
ISFDMAGKRL SADTFSLAQS GSSLQKGESL SDTALTLQAM HPDAIVLRHG ASGASAYLAR
QLDCAVINAG DGWHAHPTQA LLDGFSLFQV WESFAGKNVL LLGDIAHSRV ARSDIELLTK
LGAKVRVCAP RTLLPPALKS WPVEIEQDLG RACQDMDAVI CLRLQLERQQ AGLLPDLREY
ARHFGLGPAH LSHARTGARI LHPGPINRGI EIAAELADAP NSLILDQVSS GVATRMALLY
LYLTSTREEA
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