| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2165 |
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| Symbol | |
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| ID | 8420016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2460931 |
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| End bp | 2461740 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038759 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_003199027 |
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| Protein GI | 258406285 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC GGCTCGGCTT TCTGGGCACA GGCAACATGG GCGCCGCCCT GGCCAAAGGG
ATCAGCGGAC GCGAGGATCT GGAACTCATT GGGTTTGACC CCGATCAGGA CCGGTTGCAG
GCCGTCTGCC GGGAGACCTC CATGCAAGCC GCCCCAAACG GCGAGGAAGT AGCTCGGAAT
GCTGATTGTC TGATTGTGGC CGTAAAACCG CATCTGCTCG AAACAGTAGT TGCGCCTCTG
GCCGAGATCG CCCCTTCGGG CAGTTGCCTT CTTTCGATCG CCGCCGGGGT TTCCATGTCC
ACCTTGCGCC GCGTCTGGCG CACAGACAGC CCTGTCGTGC GGACCATGCC CAACACCCCG
TCGCTGTATG GCCGGGGGGT TTTTGCCCTG TGCCTGGATG ATCCGAAGCT GACCGCAACG
CAAGCGGCCC TGTTCCAGGA TGTATTTACT GCTTTGGGGG CCGTGTATAC CTTGCCTGAG
TCCCAATTCG ACGCCTTCAC GGCGCTGATT GGATCCGGTC CGGCTTACGT CTTTGCCTTT
ATGGAAGCCC TTGTCGAAGC CGGGGTCAGC CTGGGGCTCG CCCGGAATCA GACGACCGAA
ATGGTCAATC ACTTGCTGGG TGGCGCAACC CACATGGCCG GACAGAGTTC CCTGCACGTG
AGTCAATTGC GGGAGATGGT CTCCTCTCCA GGGGGAACGA CACTGGCAGG TCTCAACCAT
TTTGATCGCC AAGCGTTTCG GGGCCTCGTC ATTGATGCTG TTCGCGCCGC CCACGACCGG
AGTCGGGAAT TGGGACAACA AGAGGACTGA
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| Protein sequence | MTIRLGFLGT GNMGAALAKG ISGREDLELI GFDPDQDRLQ AVCRETSMQA APNGEEVARN
ADCLIVAVKP HLLETVVAPL AEIAPSGSCL LSIAAGVSMS TLRRVWRTDS PVVRTMPNTP
SLYGRGVFAL CLDDPKLTAT QAALFQDVFT ALGAVYTLPE SQFDAFTALI GSGPAYVFAF
MEALVEAGVS LGLARNQTTE MVNHLLGGAT HMAGQSSLHV SQLREMVSSP GGTTLAGLNH
FDRQAFRGLV IDAVRAAHDR SRELGQQED
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