| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2155 |
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| Symbol | |
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| ID | 8420006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2451068 |
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| End bp | 2451772 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645038749 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003199017 |
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| Protein GI | 258406275 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.164337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTTGG AAAATTGGCA AATTGTATGG GAAAACATGG ACTACTTCCT CATCGGTCCC
TACCCGGACG GACCGTTGGG CGGCCTAGCC ATGTCCATTC TTTTGGCGCT CGGCGGTATC
TTTGGAGCCT TTTGGGTCGG GCTTGTCTTT GGCTTAATGC GCTTGTCCAA AAAGGCCATC
TTCCGGTTGC CTGCGCTCGT CTATATCGAA ATCATTCGCG GCACGCCGCT GTTGATGGTC
ATTTTCTGGT TTTATTTCCT CGCCCCGATC GCTTTTGGCA AACCTCTGCC CGAGGCCGCT
TCAGCCTTGA TCGCCTTTAT TGTCTTCACC AGTGCCTATG TGGCCGAGAT CGTGCGCGCT
GGGGTGCAAA GCCTGCCCAA AGGGCAGATG GAGGCCGCCC GGGGATCCGG ACTCTCCCAT
GTCCAATCCA TGCAGTACAT CATCTTGCCG CAAGCCCTGC GCAATATGAT TCCCTCGTTC
GTCAATCAGT TTGTCAGTCT GACCAAGGAT ACGTCCCTGG CCTACATTAT TGGCGTCAAC
GAATTGACCC GTACAGCGAC GCAGGTCAAC AACAGGACAT TGATCGCGCC AACGGAAATA
TTCATCACGA TCGCCCTGAT CTACTTTGTC GTCTGTTATG TTCTTACGGC CCTGAGCCGC
AAACTCGAAC GTCAAATGTC CCGGTACCAG GCCCGTGGTT CTTGA
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| Protein sequence | MNLENWQIVW ENMDYFLIGP YPDGPLGGLA MSILLALGGI FGAFWVGLVF GLMRLSKKAI
FRLPALVYIE IIRGTPLLMV IFWFYFLAPI AFGKPLPEAA SALIAFIVFT SAYVAEIVRA
GVQSLPKGQM EAARGSGLSH VQSMQYIILP QALRNMIPSF VNQFVSLTKD TSLAYIIGVN
ELTRTATQVN NRTLIAPTEI FITIALIYFV VCYVLTALSR KLERQMSRYQ ARGS
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