Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2135 |
Symbol | |
ID | 8419985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2432610 |
End bp | 2433671 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645038728 |
Product | tetraacyldisaccharide 4'-kinase |
Protein accession | YP_003198997 |
Protein GI | 258406255 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000208743 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.172594 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGATC CCGACTGGTC CCACTGGCAG GCCCGCCTGG CCCCGCTTCT CCGCCCCGCC GGCCGGCTCT ATGCCCAGGC CATGCGCTGC CGCGAACACG CCTACGCCGC CGGCTGGCTC ACCTCCTGGC GCCCGCCCGT GCCTTGCGTC AGCGTCGGCA ACATCGGTTG GGGCGGCTCC GGCAAGACAC CGCTTTGCCA GTATCTGCTC CGCCGGGCCG CAGAGCACGG CCAGCGAGCG GCCCTGCTCA CCCGTGGGTA CCGCGCCCAC CCGCCCCATC TGCCCTACCT GGTCCGCGCG GACAGCCCTC CCGACGAGGC CGGTGACGAA CCGCTTTTAC TGGCCCAGAG CTGCCCCGAA GCGCACGTCT GGGTCGATCC CCTCCGGCCC CGCGCCGGCG CCCGGGCCTG GCGCACGAGC CAGCCCGATC TCTACCTCCT GGACGACGGT TTCCAGCACC TCGCGGTCAA ACGGGATATC GATCTGGTCC TGCTCCGGCC AGAGGACCTG GACAGTCAAT GGGACACCGT CCTGCCCGGA GGGTCCTGGC GGGAAGGGCG CCGCGGACTC AGACGCGCCG ACGGGTTCTG CATCCAGGCC CCGCCCGCGC AGTGGCCCCG TCTGCGGGCC AAATTTATCG ACCGCCTCGG AGCACTGCAA AAGCCCCTGT TTTCCTTTTC TCTCACCGTC CAGGGCATCC GCCACTGCGA AACCGGTCTG CTGCGCGCGG CCCCGGGGAC CCCGTATTTG CTTATAAGCG GCGTGGCCGG ACCACAGCGG GTCCTGCGCA CCGCAACCGA CACCTTCGGC CCTCCAGTCA GACACCTCTG CTACCCGGAC CACCACCAGT TTACGGCTGC GGACTGGGAG ACCATCCAGC GCACCGCCCG CGACCACGCT TGCCCCACCG TCCTGTGCAC CCCCAAAGAC GCGGTCAAAT TGCGCTCCCT GGCCGACGAC TCCCTTTTCG CCTTTGACCT GGACCTCGCT TTTGGGCCAC AGTGGCTGGC GGCAGCCCCC TTTTCCAAGT GGCTGGAACA CCGGCTCGTC CAAAAAGTGT AA
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Protein sequence | MPDPDWSHWQ ARLAPLLRPA GRLYAQAMRC REHAYAAGWL TSWRPPVPCV SVGNIGWGGS GKTPLCQYLL RRAAEHGQRA ALLTRGYRAH PPHLPYLVRA DSPPDEAGDE PLLLAQSCPE AHVWVDPLRP RAGARAWRTS QPDLYLLDDG FQHLAVKRDI DLVLLRPEDL DSQWDTVLPG GSWREGRRGL RRADGFCIQA PPAQWPRLRA KFIDRLGALQ KPLFSFSLTV QGIRHCETGL LRAAPGTPYL LISGVAGPQR VLRTATDTFG PPVRHLCYPD HHQFTAADWE TIQRTARDHA CPTVLCTPKD AVKLRSLADD SLFAFDLDLA FGPQWLAAAP FSKWLEHRLV QKV
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