| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2124 |
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| Symbol | |
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| ID | 8419974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2415089 |
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| End bp | 2415904 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038717 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003198986 |
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| Protein GI | 258406244 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.493123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACCAT TAGCAAAGCA GAACCGCTGG TACCATATCC TCTTTTTCCT GGGGGTGGTT
GTCCTGTTTT GCTCCCCTGT CGTGGTCCTG GTGCTCTCCA GCATCGGCCC GCACTGGCAG
TTCCCCCACC TCTGGCCGCA GGAGGTGTCC TGGGAGCCGC TCAACACGCT TTGGAACCAG
CGGCTTCCCC TGCTGCGACA TCTGTCGAGT TCCATAGGCT ATTCTCTGGC AACGGTGGCG
ACCACATTGC TTATGTGCCT GACGCCCGCG GCCACCCTGG CCCACAGCCA TTTTCGGGGC
AAGACGCTTC TCGAAGGATT GTTGCTCACC CCAGCCCTGG TCCCGCCGAT GACCTATGCC
ATGGGGTTGC ACGTCGCGTT TTTGCACACC GGGCTCGCCG ACACCTTCGC TGGCGTGGTT
TTGGTCCTCT CCCTTTTCAG CTTTCCCTAT ATGCTGCGTC CCCTTGTGGC CGGATTTGAA
CAGATGGGGA CCAGTTATGG CCAATGCGCT CGCAATCTCG GCGCTTCCCG CCTGCGCACG
GCCCTGGAAA TCGAACTCCC CCTCTTGCTG CCTTCCATTC TCGCCGGAGG CAGTGTGGTC
TTTCTGGTTG CGTTCTCCGA ATATTTCCTT GTCTTTTTGA TTGGAGGCGG TTCGGTCGAA
TCCTTTACCG GTTTCCTGGT CCCCCTCCTG CAATCTTCAA ACCGCGCTCT GGCTTCGGCC
TGCACATTGC TCTTTCTGCT CGTTCCGCTC ATGTTGTTCG CCGCCAGTGA AGGCGTCGTG
GCCGCCTATT GGCGCAAACG GGGCGCCCCG ATCTGA
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| Protein sequence | MRPLAKQNRW YHILFFLGVV VLFCSPVVVL VLSSIGPHWQ FPHLWPQEVS WEPLNTLWNQ
RLPLLRHLSS SIGYSLATVA TTLLMCLTPA ATLAHSHFRG KTLLEGLLLT PALVPPMTYA
MGLHVAFLHT GLADTFAGVV LVLSLFSFPY MLRPLVAGFE QMGTSYGQCA RNLGASRLRT
ALEIELPLLL PSILAGGSVV FLVAFSEYFL VFLIGGGSVE SFTGFLVPLL QSSNRALASA
CTLLFLLVPL MLFAASEGVV AAYWRKRGAP I
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