Gene Dret_2096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2096 
Symbol 
ID8419946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2385979 
End bp2386278 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content55% 
IMG OID645038689 
ProductProtein of unknown function DUF2160, transmembrane 
Protein accessionYP_003198958 
Protein GI258406216 
COG category[S] Function unknown 
COG ID[COG5477] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0817847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCACT GGTTTCAGGA TTTCACCTCG TGGATGTATT GGACATTGCC GAGCGTTTTG 
GGAATTGGCG GTCTTTTTGC GGCCATCGGG GTCATGACGG TCTGGGATGT GCTCTCGCCC
TCAGTGGCCC GGAAGGGGTT TCTTCCCATC ACCACCACGC GTGGGGACCG GTTTTTTATC
GGCATCATCT CCACGATCGC TATTTTTCTG ATTTGGCTCG CCTTTTTGGG GCAGACGCAA
TTGTGGGCCC CGTTGGGTAT TTCCATTGTC TGGTTTGCGA TCGAAGGGAT CTGGGGCTGA
 
Protein sequence
MLHWFQDFTS WMYWTLPSVL GIGGLFAAIG VMTVWDVLSP SVARKGFLPI TTTRGDRFFI 
GIISTIAIFL IWLAFLGQTQ LWAPLGISIV WFAIEGIWG