| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1995 |
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| Symbol | |
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| ID | 8419840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2291774 |
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| End bp | 2293423 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645038583 |
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| Product | Peptidoglycan-binding lysin domain protein |
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| Protein accession | YP_003198857 |
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| Protein GI | 258406115 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACT ACAAGCTACT GAACCTCACC CGGGAACCAT TTTCTAATTC TCCGGACCCA
GACCTATTTT TTCGCTCTTC CAAACATGCG GACTGCCTGC ACAATATTGA AATAGCTCTC
CGACTACACA GAGGACTTTG CGTTGTCTGT GGAGAGGTAG GCACTGGCAA GACTACGATT
TGCAGGCACC TGCTCCAGTC CACAGTCGAC GATGACTCCC TGGAAATGCA CCTGATCCTG
GATCCTTCCT TTAACGATGA ACTGGAAATG TTGAGCACCA TCAACTCTAT GTTCAATGGT
CCAGGTGAGG CCGGTCAATG CCAGAACGCC GGGCAGCATA AGGAGATGAT CAAGGATTAT
CTCTTCCTAC AGGGAGTCGA CAGGCAAAAG ACGATTGCGC TTTTGCTTGA CGAAGGGCAG
AAGCTGACCA GCACCGGGGC TGAAATTTTG CGCGAGCTGT TAAACTTCGA AACGAATTCG
CAAAAGCTTG TACAGATCCT CATTTTTGCC CAACGGGAGA TCGACCAGCT CCTGGAGCAA
ATGCCCAATT TCGCTGACCG GATCAGCCTG TATCACCAGC TGTTGCCTTT GAGCCGCAAA
GACACGGATT TGTTCATCCG CTACCGCCTG GACCGGTCCT GCGCAAGCGA CCCAGAGCAA
AAAAAAGTCG TCTTTACTCG CCGGGCCCTG CGTCTCGTGC ACACCATGAC TGGGGGATAT
CCCCGCAAGA TCATAAACCT GGGCCACAAT ATCCTTTTGA CCCTTATCAT CAAAGGTACG
CACAAGGTCA CTCCTGCAGT GGTCCGCCAT GCTGCCCGCA ACCTCCAAGC CCTGCATTGC
CCTTTGCCCT GGACACGACT GTTCTGGTGC GCAGGGGGTA TGGTTATACT GGCTCTCTTG
TGGACTTTTA ACGCTATATA TACCAACTCT GCATTTATGG ACCCCACTGT CTTTGAAAGC
CTGAATCGAT CAACATCAGA GCAATCACTC TCCTCGACAC CGCCCCCGGA CCAAGAACAC
AATTCACAAC CTGCTGTCCT CCAGCCGATC CAAAAAAAAA TACATACGTC ACCACTAGCA
AAGAGGAGCC CCGAAGGTGC CCATGCCCAG GGCGAACCTC AGAATCTGCC ACCTACAGAG
TTTACACCTA CTCCATCCCC CATAGATGAT CAAAACCCCA GTCTTCCTCA ACTCCTTGGT
TCCGTCCATG TCAACAGAAA TGAAAATTTG TGGAATATAG CCCAGGGGAT ATATGGCACC
AGCAGCGAGG ATCTTTTACA GGAACTCATC CAGGCGAATC CGGAAATTGA AAACCCTGAC
ATCATTCACC AGGGTCAACA GATACATATC CCCGCAACAG GATTTGAGCC TGCGAAGGAA
AATCAACAAT ATTGGATTGT CACTTCTACC CATACAAAAC TTGATGAAGC CTATGATGCC
ATGTTGGATG GCCCGGATCG ACTCCGCGTT CTCTGCACCT GGGATTCCAA AAATGGCCTT
CAATACCATG TAGTAGTCAA GACGCCCTTT CGGCAGTCGA AACAAGCAAA AAAAACTATG
CAAGATGTCG AATACAATAT TTTTGCAGGT GCCCAGGTAC TGGATGCAAA TAATATGTAC
ATTGGCAATA TTGCGCAAGA CATAGAATAG
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| Protein sequence | MDYYKLLNLT REPFSNSPDP DLFFRSSKHA DCLHNIEIAL RLHRGLCVVC GEVGTGKTTI
CRHLLQSTVD DDSLEMHLIL DPSFNDELEM LSTINSMFNG PGEAGQCQNA GQHKEMIKDY
LFLQGVDRQK TIALLLDEGQ KLTSTGAEIL RELLNFETNS QKLVQILIFA QREIDQLLEQ
MPNFADRISL YHQLLPLSRK DTDLFIRYRL DRSCASDPEQ KKVVFTRRAL RLVHTMTGGY
PRKIINLGHN ILLTLIIKGT HKVTPAVVRH AARNLQALHC PLPWTRLFWC AGGMVILALL
WTFNAIYTNS AFMDPTVFES LNRSTSEQSL SSTPPPDQEH NSQPAVLQPI QKKIHTSPLA
KRSPEGAHAQ GEPQNLPPTE FTPTPSPIDD QNPSLPQLLG SVHVNRNENL WNIAQGIYGT
SSEDLLQELI QANPEIENPD IIHQGQQIHI PATGFEPAKE NQQYWIVTST HTKLDEAYDA
MLDGPDRLRV LCTWDSKNGL QYHVVVKTPF RQSKQAKKTM QDVEYNIFAG AQVLDANNMY
IGNIAQDIE
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