| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1936 |
|---|
| Symbol | |
|---|
| ID | 8419781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2217993 |
|---|
| End bp | 2219000 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645038524 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003198798 |
|---|
| Protein GI | 258406056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCGC AGCAATCAAT GGTGGAATCA ATGCGTGAAC AACGAACCTG CCAGGTGGTG
GATCCGGGTC AACTGGATTG CAGCGGCAGT TGGCTGCGGA ACAAGGTGGA GCCGGAGCCA
GCCCTGGTCG AATCCCTGCA GACAATTGGG CAGCTTGAGC CGATCCTGAT GTTTTCCGAG
GCGGGCCGGA TGCGCGTTTT GCATGGCGGG CAGCGGGTGC TGGCCTGCCG CGTGCTCGAA
CAACCGGTCC TTGCTGTCAA AACCGCAGCG CCCGAGACGG TGCTGGAGGC TGCCCTGATC
CATTTGGCCG CGAATTGGGG GCGGGGTCTC AGCGAGGACC AGCGACTCCT CTATCTGCGG
GCGGTGGACG GGAGCATTTC CCGGCAGCGG TTGCAGACTG AGCTTTTTCC GGCCCTTCAG
GTCGCGGCGC AAAGCCGCCA GGGACGGTGC CTGCAGGCCT GGCTGGACCT GGAACCCGAA
TGGGACGACT GTCTGGCAAA GGGCTTTGCC CCTCTGGATA TCGCTCCTCT TGTCAGCCGG
TTGAGCGCCG GGGAGCGCCA GGTCCTGCTG CCCTGTTTTC AAAACCTGCG CTGGTCGAAA
AATAATGCCG TGCATCTGGT CCAATGGTTG TGGGAAATCC GGGCCCGGGA TCAAATTGGG
CTCGAGGCGC TCTGGGCCGA GCTTGATCTG TCGGGGCTTT TGGATCTGGC CCAGGACTGG
TCCCCCAAAG ACCGCATTCA GCGCATTCTC GAAGCGGTCC AGGCCAAGCG GTATCCGCAT
CTCAGCGCCA TGCGCGAGCG GGTTCAGACC ACAAAGCAGC GGCTGAGCAA AGGCCATTTC
TGGAAGGTGG ACCATGATCC GAACTTTGAG AGCACAGCTG TTGTTCTCTC CCGGCGGCTG
CGCCGCGAGG AGGACCGGGA GACCGTTGCC GCGGAATTGA CAGCCCTGTG CCAGTCTTCC
GAATGGGGTG CATTGTGGGC GGCCCTGTCC GGGGAGGCAG AGGTATGA
|
|---|
| Protein sequence | MEAQQSMVES MREQRTCQVV DPGQLDCSGS WLRNKVEPEP ALVESLQTIG QLEPILMFSE
AGRMRVLHGG QRVLACRVLE QPVLAVKTAA PETVLEAALI HLAANWGRGL SEDQRLLYLR
AVDGSISRQR LQTELFPALQ VAAQSRQGRC LQAWLDLEPE WDDCLAKGFA PLDIAPLVSR
LSAGERQVLL PCFQNLRWSK NNAVHLVQWL WEIRARDQIG LEALWAELDL SGLLDLAQDW
SPKDRIQRIL EAVQAKRYPH LSAMRERVQT TKQRLSKGHF WKVDHDPNFE STAVVLSRRL
RREEDRETVA AELTALCQSS EWGALWAALS GEAEV
|
|---|
| |