Gene Dret_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1825 
Symbol 
ID8419666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2095407 
End bp2096093 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content58% 
IMG OID645038409 
Producthypothetical protein 
Protein accessionYP_003198687 
Protein GI258405945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.539213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC AACTCCAGCC GCTCTTGGAG CGCCTGCAAA AAGAAGGCGT TGAAGAAGCC 
GAACGCCAGG CCGAACATAT TGTGTCCCAG GCCCAGCAAA AGGCCTCCTC CATCGTCCGC
CAGGCCGAGG AGCGCAAAAA ACACCTCCTG GAAGAGGCCA GGCGGGAAGC GGAGGTCTAC
ACGGAACGCA GCCGGACCAC CCTGGAACAA TCCGCCCGGG ATTTGTTGCT CACCGCAGCC
AACGGGATTG AAAATATCCT CTCCGATCTG GTTGCTGAAG CCGTGGACGA GGCTCTGGAC
GACCAGACGC TCAAAGACAT GCTCGTCAAA TTCGTCGAAA CGTGCGCCGC CGATCAAGAC
GCCGGGAATT GGGAAATCCG GGTCAGGCCG GAGGACAAGC AGAAGTTGAT CCAGTTTTTC
GCCCAGCGGT ACAAACAGCG TATGCGCCAG GGGATAGAGA TCAAGGACGA CCAGGAAATC
CTGCGCGGTT TTCAGATTTC CTTTCGCGAC AGCCATATTT CGCTCGACTT CAGCGCCGAA
GCGATCAGCG AAGCCTTGAG CGAGATTCTC CAGCCCCACC TAGCGGAAAT CGTGACCCGG
GTCGCCGCAG AAAAACAGAC CACCGAACGC ATTCGGGCCT GTCTCGAGGG TGACGACAAC
CTCTCGCCTC AAAGCGAGCA CGCATGA
 
Protein sequence
MSDQLQPLLE RLQKEGVEEA ERQAEHIVSQ AQQKASSIVR QAEERKKHLL EEARREAEVY 
TERSRTTLEQ SARDLLLTAA NGIENILSDL VAEAVDEALD DQTLKDMLVK FVETCAADQD
AGNWEIRVRP EDKQKLIQFF AQRYKQRMRQ GIEIKDDQEI LRGFQISFRD SHISLDFSAE
AISEALSEIL QPHLAEIVTR VAAEKQTTER IRACLEGDDN LSPQSEHA