Gene Dret_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1818 
Symbol 
ID8419659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2088695 
End bp2089420 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content55% 
IMG OID645038402 
Producthypothetical protein 
Protein accessionYP_003198680 
Protein GI258405938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.258127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCTG TCTATGCCCC TCTTCGAGAA CGATTGTACG CCATTTGTGA AGCCGAGCGG 
CTTCTTGGAG AACACGTCCA TATTCAGGCT CGGGTGCTGA GTACTGAAGA AGCGATCGGC
AATCCGGAAG GGGACGATTT CCCCTTGCAA AAGGGCCGGG AACGGTTGAT GGAGGCCAGT
TTCGGACAGG GACGGGGACA GGCCTTTACC GATCGTTTTG GTGATTTTTC TGGACGGCTG
GACCAGATTC TGGAGATGGA ATTGCAAAAT AATTACCGGC GAGCCGTATT CGTGGCAACC
ATGAACGCGG TCCTGCATCA TCTGGGGCAG GTTGGTGGAA CGATCCATTG CCGAGACAGC
GCCCCAACGG AGTGCGCCGC TAAGCTGGCC GAACATCTGC ACAACGAATA CGGGCGCCCC
AGAATTACCC AGATCGGGTA TCAACCCAAA ATGGTCGAAC GGCTCCAGGA CCATTTTGAG
TACCGCATTG TCGACCTCGA TCCCGAAAAT ATCGGGCAGG CAAAGGGAAA GGTGGTTGTC
GAAGGGCCGG AAACAAGCGC GGAGGCACGT GAGTGGGCGG ATCTCCTTTT GGTCACCGGC
ACCACTTTGG TCAACGACAC CATTACCGAT TTTTTGAATG GCAAAGAGGT CCTGTTCTAT
GGGACCACCG TGGCTGGAGC GGCGGCACTT ATGGATTGGC CCCGGTTTTG TGCCTGCAGT
TCGTAA
 
Protein sequence
MHSVYAPLRE RLYAICEAER LLGEHVHIQA RVLSTEEAIG NPEGDDFPLQ KGRERLMEAS 
FGQGRGQAFT DRFGDFSGRL DQILEMELQN NYRRAVFVAT MNAVLHHLGQ VGGTIHCRDS
APTECAAKLA EHLHNEYGRP RITQIGYQPK MVERLQDHFE YRIVDLDPEN IGQAKGKVVV
EGPETSAEAR EWADLLLVTG TTLVNDTITD FLNGKEVLFY GTTVAGAAAL MDWPRFCACS
S