Gene Dret_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1789 
Symbol 
ID8419630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2057280 
End bp2057624 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content57% 
IMG OID645038373 
Productprotein of unknown function DUF498 
Protein accessionYP_003198651 
Protein GI258405909 
COG category[S] Function unknown 
COG ID[COG1504] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATAG AATTGTATAA ATTCGGCCGC ATCGTCATCC AGGGGCAGAC CTATACCCGA 
GACGTGAAGA TTCTCGAAGG GCGGGTGGTT CCCCATTGGT GGCGAGAAAG CGGACACCGG
GTCGTGCTCG GTGACATCCG TGATCTATTG CGCACCGCAC CCGAGGTAAT CGTCTTTGGG
ATGGGCAAAC CCGGGCTGAT GCGATTGGAT CCGGATGTCC GGGACTACCT CCAGCGAGAG
GAAATCGAAA CAATCGAACA GCCCACGGCC CAGGCGATGG AGACGATCAA TTCCCTCCTC
CAGTCTGGCC GGCGAATGGC TGCCGGGATA CATTTGACCT GTTAA
 
Protein sequence
MFIELYKFGR IVIQGQTYTR DVKILEGRVV PHWWRESGHR VVLGDIRDLL RTAPEVIVFG 
MGKPGLMRLD PDVRDYLQRE EIETIEQPTA QAMETINSLL QSGRRMAAGI HLTC