Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1697 |
Symbol | |
ID | 8419528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1955003 |
End bp | 1955419 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645038271 |
Product | hypothetical protein |
Protein accession | YP_003198559 |
Protein GI | 258405817 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.123026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00650973 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATTCGC AGTCAGTTAG AAGACTAGAT CGTGGCGCCG GGTTTACATT GTTAGAGGTG TTGGTCGCCA TCGTGATTCT GTCCGTAGGT ATTATGGCCT GGGCCCTGGC GCAAAATCAG CACATTCAGG GGCGTGCGTT GAGTGGCGGA CTGACCAAAG CGACGGAACT GACCCAGTCT GTTCTCGAGG CGAATGCCAC AGAGGTTGCC GGCTGGGATG CGAGCCGTTC CAGCACCAAC GGAACCGTAC AGTATACATT CGCCAACCTC ACCTTCACAA CGTTTTGGGA GGTGATTGAA GGGTCTGCTC CCTTCGGGAG CGCGAATCTT TCGACATGGC AGGTTCACTG TGAAACGACA TGGACGCAAT ACGGGGAGCA CCGGGTTGCA ATGGAACGCT TGGTGGTGGG GCAATGA
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Protein sequence | MDSQSVRRLD RGAGFTLLEV LVAIVILSVG IMAWALAQNQ HIQGRALSGG LTKATELTQS VLEANATEVA GWDASRSSTN GTVQYTFANL TFTTFWEVIE GSAPFGSANL STWQVHCETT WTQYGEHRVA MERLVVGQ
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