Gene Dret_1653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1653 
Symbol 
ID8419484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1906213 
End bp1907046 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content64% 
IMG OID645038227 
Producthypothetical protein 
Protein accessionYP_003198515 
Protein GI258405773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.86808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTAT CGCCCTTGCT TCCTTGTCCT GCTTCGCTGT CCTTCCGGCG CAGTGCCGCG 
CCCTTGGTCC TGGTGCTCCT CTTCCTGGGG GGAGTTTTCC CCGGTCTTTC GACCGCCCAG
GCCACCAATG CGACCCAGCC TGCAACAGCC CTCTCCCAGG CCGTACGCCA GGAGATCGAA
GCGCAACGCC AAGCGGGCCG ATGGACAGAA GAAAAACAGG CCGTGATCCA AAAGCTGCTC
GACCTCAAAA CCCGGCTGGC CTGGACGGAA TTCAAGAACA GACAGCTGAC GGCGAGCACA
CAACGCACCC GCCTCGAACT CGAACGGGTC CGCCAGGAAA ACGAAAATCT CAAGGCCCTC
CGCCGCCACT TGGCCCCCTC CCTGGAAACC GTGATTGAGG AACTCGCCAC CCTGGTCGAA
AACGACCTCG CCTTTCTGGA ATCAGAGCGC CGCGACCGCC TCGCCTTTCT GCGTCAAAGC
GTTCTCGACG CCGAACTCGA CCTGGCAACC CGGCTTGATC GGGTTTTGCA AGGGCTGCTG
GTCGAGGCGA GCTACGCCGG GGACATCGCC TTGCACACGA CTCGACTCGA GCGCGGCACC
TCCTCGCTGC AGGTGCGCCT GCTACGGCTG GGACGACTGG GCAAATACTA CCTGAGCCTT
GACGGCAGCC ACGGCGGGTG GTGGGACGCC CGGGAGCAAC AATGGCGGGA CCTGCCAGGA
TCGCTTCTGC CCGAACTGCG CCGCGCCTAT GCCATCGCCG AGGACAGGGC GGCCGCCGAA
TTCGTCAGCT TGCCCCTTCC CCATTCAGGA AGCGCTACCG AGGAGGACCG CTAA
 
Protein sequence
MSLSPLLPCP ASLSFRRSAA PLVLVLLFLG GVFPGLSTAQ ATNATQPATA LSQAVRQEIE 
AQRQAGRWTE EKQAVIQKLL DLKTRLAWTE FKNRQLTAST QRTRLELERV RQENENLKAL
RRHLAPSLET VIEELATLVE NDLAFLESER RDRLAFLRQS VLDAELDLAT RLDRVLQGLL
VEASYAGDIA LHTTRLERGT SSLQVRLLRL GRLGKYYLSL DGSHGGWWDA REQQWRDLPG
SLLPELRRAY AIAEDRAAAE FVSLPLPHSG SATEEDR