Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1512 |
Symbol | |
ID | 8419341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1756071 |
End bp | 1757528 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645038086 |
Product | protein of unknown function UPF0061 |
Protein accession | YP_003198376 |
Protein GI | 258405634 |
COG category | [S] Function unknown |
COG ID | [COG0397] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.385999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.55294 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCAAT TTGATACGAG CTACGCACGT CTTCCACACC CCTTCTATAC ACGGGTGAGT CCGGCCCAGG TCCCCAAACC GGAACTCATC ACCTTCAACA GCGATTTGGC CAGACAATTA GGGGCCCAGG ACACAAACCA ATCAGACACG CAATTGGCGG AGATCTTCAG CGGCCAACGC CTGCTCCCTG GCTCCGAGCC CATTGCCATG GCCTATGCCG GCCATCAATT CGGCAACTTC GTGCCCCAAC TCGGAGACGG CCGGGCGCTC TTGCTGGGAG AAGTGGTGGG TCCTGCCGGG CACCGGTTTG ACATTCAGCT CAAAGGCTCC GGGAGAACCC CTTTTTCCAG AAACGGCGAT GGCAAGGCCC CCCTTGGTCC CGTCCTGCGG GAATACATTG TCAGCGAGGC CCTGCACCAT CTGGGCATGC CCACCACTCG TTCCCTGGCC GCGGTCAAGA CCGGGGAAAC GGTACGCAGG GAAACCCCGC TTCCCGGAGC TATCCTGACC CGGGTCGCCT CAAGCCATAT CCGGATCGGC ACCTTCGAAT ACTTTGCTTT CAAACAGGAC GTGGACAATC TCAAGCGGTT GACCGAGTAC TCCATCCAAC GGCATTATCC CGAAATTCAA AACGATCCTC AGGCCGATCT GCACTTTTTC CGCAACGTGG GACAGACCCA GGTCGAGTTG GTGACCGGCT GGATGGCGCT GGGCTTCATT CACGGGGTGA TGAACACGGA CAACATGTCC ATCGCCGGAG AATCCATCGA CTTCGGGCCC TGCGCCTTCA TGGACCAGTT CCGGTTCGAT CAGGTCTTCA GCTCCATCGA CCAATTCGGC AGGTACAATT ACTCCAACCA GGCCCAGATC ACGCTCTGGA ACCTCTCCAG ATTCGGCAAT TGCCTGCTTC TTCTGCACCA GGACATATCA GAAGACGAAC TCCGGAAATG GAACCAGGAA CTGGAAGCCC TTCAGGACCT TTTCGAACAC AGGCATACAA TAAAGATGCT GGAAAAATTG GGGATATTTG ACTACGAACG CCCCAACGAC CGCGAGCTTA TCCAAAAGTG GCTCCGCTAT CTGGAAGCCG AGCATCTCGA TTACACCTTG AGCTTTCGCG CCCTGGCGCC CCTGGTGGAC CAGGAGGCAG GCTGGGGGGC TTTCAAAAAG ACCGAGGCCT TCCAGGAGTT TTACAACCTC TGGCAAGAGC GCCTTCACCA GCAGGACCTG GAAGTCACGG CCATACAGGA ACGAATGAAC CAGGTAAATC CCGTGTTTAT TCCCAGAAAC CACAAGATCG AAGAGGTTAT TGAAGCTGGC CGGAGGGGTG ACTTCAGCCC CTTTCATGAG ATGAACGAGG TACTGCAAAC CCCATTTCAC GAACAAGAGG GACGCAGCAG CTACCGAGCA GCTCCCAGAC CGGAGGAGAT GGTCCAGGCT ACGTTTTGCG GGACCTGA
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Protein sequence | MFQFDTSYAR LPHPFYTRVS PAQVPKPELI TFNSDLARQL GAQDTNQSDT QLAEIFSGQR LLPGSEPIAM AYAGHQFGNF VPQLGDGRAL LLGEVVGPAG HRFDIQLKGS GRTPFSRNGD GKAPLGPVLR EYIVSEALHH LGMPTTRSLA AVKTGETVRR ETPLPGAILT RVASSHIRIG TFEYFAFKQD VDNLKRLTEY SIQRHYPEIQ NDPQADLHFF RNVGQTQVEL VTGWMALGFI HGVMNTDNMS IAGESIDFGP CAFMDQFRFD QVFSSIDQFG RYNYSNQAQI TLWNLSRFGN CLLLLHQDIS EDELRKWNQE LEALQDLFEH RHTIKMLEKL GIFDYERPND RELIQKWLRY LEAEHLDYTL SFRALAPLVD QEAGWGAFKK TEAFQEFYNL WQERLHQQDL EVTAIQERMN QVNPVFIPRN HKIEEVIEAG RRGDFSPFHE MNEVLQTPFH EQEGRSSYRA APRPEEMVQA TFCGT
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